CATH Domain: 1v3vA01 XML data for domain: 1v3vA01

Molscript image for 1v3vA01
1v3vA01
PDB coordinates for domain 1v3vA01

PDB 1v3v, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.180 Quinone Oxidoreductase; Chain A, domain 1
3.90.180.10 Medium-chain alcohol dehydrogenases, catalytic domain Gene3D
3.90.180.10.14
3.90.180.10.14.1
3.90.180.10.14.1.1
3.90.180.10.14.1.1.1
3.90.180.10.14.1.1.1.1

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Segment boundaries for domain 1v3vA01

Chopping figure for domain 1v3vA01
DomainStart PDB ResidueStop PDB Residue
1v3vA01 -4 120
1v3vA01 299 329
1v3vA02 121 298

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.90.180.10.14.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1o89A01 82.57 Putative quinone oxidoreductase yhdHEscherichia coli K-12 3.90.180.10 153 15 87 3.39 3.86
1iz0A01 81.68 NADPH2:quinone reductase [EC:1.6.5.5]Probable quinone oxidoreductaseThermus thermophilus 3.90.180.10 138 23 81 2.68 3.30
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v3vA01
SPEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGAVMMGQQVARVVESKN
SAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGHEHVTKGFENMPAAFIEMLNGANLGKAVVTA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v3vA01
SPEFMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGAVMMGQQVARVVESKN
SAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGHEHVTKGFENMPAAFIEMLNGANLGKAVVTA
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:39

Assigning to "3.90.180.10" based on similarity with "1v3uA01" (NWSI: 100, NWO: 100, SPS: 96.05, SPO: 93, RMSD: 0.69)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1v3vA01"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1v3vA01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1v3vA01"

Insertion by auto on 09 Mar 2006 01:01

Final ChopClose added based on similarity with "1v3tA" [LEE: 0, LME: 0, MR: 0, LG: 0, SS: 98.43, SI: 100, SO: 100]