CATH Domain: 1v2xA00 XML data for domain: 1v2xA00

Molscript image for 1v2xA00
1v2xA00
PDB coordinates for domain 1v2xA00

PDB 1v2x, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1280 Alpha/beta knot
3.40.1280.10 Gene3D
3.40.1280.10.8
3.40.1280.10.8.1
3.40.1280.10.8.1.1
3.40.1280.10.8.1.1.1
3.40.1280.10.8.1.1.1.1

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Segment boundaries for domain 1v2xA00

Chopping figure for domain 1v2xA00
DomainStart PDB ResidueStop PDB Residue
1v2xA00 1 191

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.1280.10.8.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3dcmX00 80.80 Thermotoga maritimaUncharacterized protein TM_1570 3.40.1280.10 188 14 77 3.38 4.36
1k3rA01 78.47 Hypothetical proteinMethanothermobacter thermautotrophicus str. Delta HConserved protein 3.40.1280.10 191 12 75 3.34 4.43
1vhkA02 77.65 Bacillus subtilisRibosomal RNA small subunit methyltransferase ERibosomal RNA small subunit methyltransferase E [EC:2.1.1.-] 3.40.1280.10 160 10 74 3.65 4.91
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v2xA00
MRERTEARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNETSGGSHKWVYLRVHP
DLHEAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVI
LFEAQRQRLKAGLYDRPRLDPELYQKVLADW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v2xA00
MRERTEARRRRIEEVLRRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNETSGGSHKWVYLRVHP
DLHEAFRFLKERGFTVYATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVI
LFEAQRQRLKAGLYDRPRLDPELYQKVLADWLRK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:04

Cut based on decision in database "DomChop" on "cathdb"