CATH Domain: 1v0eD02 XML data for domain: 1v0eD02

Molscript image for 1v0eD02
1v0eD02
PDB coordinates for domain 1v0eD02

PDB 1v0e, Chain D, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.10 Gene3D
2.120.10.10.9
2.120.10.10.9.1
2.120.10.10.9.1.1
2.120.10.10.9.1.1.1
2.120.10.10.9.1.1.1.1

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Segment boundaries for domain 1v0eD02

Chopping figure for domain 1v0eD02
DomainStart PDB ResidueStop PDB Residue
1v0eD01 245 311
1v0eD02 312 424
1v0eD02 510 756
1v0eD03 425 509
1v0eD04 757 910

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.120.10.10.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1ofzA00 73.17 Fucose-specific lectinAleuria aurantia 2.120.10.70 312 6 73 3.27 4.43
1rwiA00 72.12 Serine/threonine protein kinase, bacterial [EC:2.7.11.1]Serine/threonine-protein kinase pknDMycobacterium tuberculosis 2.120.10.30 256 8 67 3.37 4.99
1npeA00 71.56 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 6 63 2.99 4.74
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1v0eD02
VQGELFKITDTPYYNAWPQDKAFVYENVIYAPYMGSDRHGVSRLHVSWVKSGDDGQTWSTPEWLTDLHPDYPTVNYHCMS
MGVCRNRLFAMIETRTLAKNALTNCALWDRPMSSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYF
PDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKV
GDDLIMFGSERAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYY
MFGGEDHFNPWTYGDNSAKDPFKSDGHPSDLYCYKMKIGP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1v0eD02
VQGELFKITDTPYYNAWPQDKAFVYENVIYAPYMGSDRHGVSRLHVSWVKSGDDGQTWSTPEWLTDLHPDYPTVNYHCMS
MGVCRNRLFAMIETRTLAKNALTNCALWDRPMSSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYF
PDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKV
GDDLIMFGSERAENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYY
MFGGEDHFNPWTYGDNSAKDPFKSDGHPSDLYCYKMKIGP
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:05

Assigning to "2.120.10.10" based on similarity with "1v0eB02" (NWSI: 100, NWO: 98.8888888888889, SPS: 98.63, SPO: 98, RMSD: 0.16)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1v0eD02"

Flow stage update by auto on 28 Apr 2006 17:45

All required files are present for Domain "1v0eD02"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1v0eD02"

Insertion by auto on 06 Mar 2006 00:03

Cut based on decision in database "DomChop" on "cathdb"