Set cath from cathlist by auto on 05 Mar 2006 19:27
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
| Domain | Start PDB Residue | Stop PDB Residue |
|---|---|---|
| 1uxtA01 | 16 | 264 |
| 1uxtA01 | 469 | 492 |
| 1uxtA02 | 267 | 464 |
There are 3 matching structural neighberhood comparisons for CATH ID 3.40.605.10.10.1.1.1.1 (SIMAX score < 5)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
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1t90A01 | 88.32 | 3.40.605.10 | 280 | 22 | 95 | 2.00 | 2.09 | |
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1a4sA01 | 87.12 | 3.40.605.10 | 260 | 26 | 89 | 1.94 | 2.17 | |
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1ad3A01 | 83.22 | 3.40.605.10 | 247 | 17 | 83 | 2.47 | 2.96 |
>pdb|1uxtA01 VPVYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG GVKQYVMELGVFREGIGYAVEAVTAYKTIVFNY
>pdb|1uxtA01 VPVYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLD VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAV NKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG GVKQYVMELGVFREGIGYAVEAVTAYKTIVFNY
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"
PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"