CATH Domain: 1usmA00 XML data for domain: 1usmA00

Molscript image for 1usmA00
1usmA00
PDB coordinates for domain 1usmA00

PDB 1usm, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.1360 Gyrase A; domain 2
3.30.1360.20 Gene3D
3.30.1360.20.2
3.30.1360.20.2.1
3.30.1360.20.2.1.1
3.30.1360.20.2.1.1.1
3.30.1360.20.2.1.1.1.1

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Segment boundaries for domain 1usmA00

Chopping figure for domain 1usmA00
DomainStart PDB ResidueStop PDB Residue
1usmA00 1 80

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.30.1360.20.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1xxaC00 83.99 Transcriptional regulator of arginine metabolismArginine repressorEscherichia coli K-12Plasmid recombination 3.30.1360.40 73 9 84 2.59 3.07
1b4bA00 83.47 Geobacillus stearothermophilusArginine repressor 3.30.1360.40 71 5 81 2.42 2.96
2phcB01 83.28 Pyrococcus horikoshiiPutative uncharacterized protein PH0987 3.30.1360.40 83 9 78 2.43 3.10
1in0A01 83.01 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 8 71 2.08 2.91
2f1fA01 81.12 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 14 79 3.17 3.98
2zfzF00 80.85 Transcriptional regulator of arginine metabolismArginine repressorMycobacterium tuberculosis 3.30.1360.40 76 9 84 3.48 4.12
1mwyA00 78.83 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Detoxification of zinc ionLead, cadmium, zinc and mercury-transporting ATPaseEscherichia coli K-12Response to cadmium ion 3.30.70.100 73 4 81 3.82 4.67
1harA02 78.55 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 69 7 83 3.25 3.91
3cnqP00 77.14 FibrinolysisSerine-type endopeptidase activityBacillus amyloliquefaciensSubtilisin BPN'Proteolysis 3.30.70.80 71 4 68 3.31 4.81
1eayD00 77.12 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 4 77 3.13 4.02
1wqgA02 76.94 Ribosome recycling factorMycobacterium tuberculosisRibosome-recycling factor 3.30.1360.40 75 4 62 2.57 4.12
2p8tA02 75.98 Pyrococcus horikoshiiPutative uncharacterized protein PH0730 3.30.1360.30 109 7 63 2.97 4.69
2ofhX00 74.23 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Zinc-transporting ATPaseSynechocystis sp. PCC 6803 3.30.70.100 71 8 85 4.02 4.69
2kt2A00 73.68 Mercuric reductasePseudomonas aeruginosaMercuric reductase [EC:1.16.1.1] 3.30.70.100 69 7 71 3.43 4.80
1l0wA03 73.18 Aminoacyl-tRNA biosynthesisAspartyl-tRNA synthetase [EC:6.1.1.12]Thermus thermophilusAspartyl-tRNA synthetase 3.30.1360.30 138 5 50 2.49 4.98
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1usmA00
MDWEERKRLVKTFAFPNFREALDFANRVGALAERENHHPRLTVEWGRVTVEWWTHSAGGVTEKDREMARLTDALLQR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1usmA00
MDWEERENLKRLVKTFAFPNFREALDFANRVGALAERENHHPRLTVEWGRVTVEWWTHSAGGVTEKDREMARLTDALLQR
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:09

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:09

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:33

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"