CATH Domain: 1un6D02 XML data for domain: 1un6D02

Molscript image for 1un6D02
1un6D02
PDB coordinates for domain 1un6D02

PDB 1un6, Chain D, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.160 Double Stranded RNA Binding Domain
3.30.160.60 Classic Zinc Finger Gene3D
3.30.160.60.12
3.30.160.60.12.1
3.30.160.60.12.1.1
3.30.160.60.12.1.1.1
3.30.160.60.12.1.1.1.1

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Segment boundaries for domain 1un6D02

Chopping figure for domain 1un6D02
DomainStart PDB ResidueStop PDB Residue
1un6D01 133 159
1un6D02 160 190

Structural Neighbourhood (15 entries)

There are 15 matching structural neighberhood comparisons for CATH ID 3.30.160.60.12.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 15 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tf3A01 89.52 3.30.160.60 30 13 93 1.76 1.88
1tf6D04 87.66 3.30.160.60 30 20 96 1.78 1.84
1x5wA01 86.18 Homo sapiensZinc finger protein 64, isoforms 1 and 2 3.30.160.60 28 17 87 1.33 1.53
1tf6A03 85.66 3.30.160.60 34 22 88 1.87 2.12
1bboA02 85.64 DNA bindingNucleusHeavy metal binding (Cu, Fe, Zn)Zinc finger protein 40Homo sapiens 3.30.160.60 31 25 90 2.06 2.28
2adrA01 84.86 NucleusRegulation of carbohydrate metabolic processTranscription factor activityRegulation of C-compound and carbohydrate metabolismNegative regulation of transcription from RNA polymerase II promoter by glucose 3.30.160.60 29 10 90 2.48 2.75
1bgwA01 78.29 Meiotic recombinationSynaptonemal complexDNA topoisomerase IIDNA topoisomerase (ATP-hydrolyzing) activityDNA topology 3.30.1490.30 43 12 72 3.27 4.54
1bbgA00 77.90 Ambrosia trifidaPollen allergen Amb t 5 precursor 3.30.160.80 40 9 65 1.98 3.05
1pjqA02 76.66 Precorrin-2 dehydrogenasePorphyrin and chlorophyll metabolismUroporphyrin-III C-methyltransferaseSiroheme synthaseSalmonella typhimurium 3.30.160.110 35 3 85 3.32 3.87
1yuiA00 76.51 3.30.160.60 54 16 51 1.85 3.57
1ncsA00 76.18 NucleusTranscription activationPheromone response, mating-type determination, sex-specific proteinsTranscriptional factor SWI5General transcription activities 3.30.160.60 47 16 63 2.37 3.71
1kyqA02 76.02 Sulfate assimilationAmino acid metabolismMetabolism of porphyrinsSiroheme biosynthetic processSirohydrochlorin ferrochelatase 3.30.160.110 37 6 81 3.63 4.48
2r85A03 74.93 Pyrococcus furiosusPutative uncharacterized protein PF1517 3.30.1490.20 58 9 53 1.87 3.50
1llmD02 74.49 Transcription factor activityDNA bindingPositive regulation of gene-specific transcription involved in unfolded protein responseNucleusAmino acid biosynthetic process 3.30.160.60 55 12 49 1.60 3.26
1k2fA02 72.15 Protein bindingUbiquitin-protein ligase activityUbiquitin mediated proteolysisWnt signaling pathwayP53 signaling pathway 3.90.890.10 56 19 42 1.45 3.38
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Displaying entries 1 to 15 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1un6D02
AGYPCKKDDSCSFVGKTWTLYLKHVAECHQD
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1un6D02
AGYPCKKDDSCSFVGKTWTLYLKHVAECHQD
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 06 Mar 2006 00:00

Cut based on decision in database "DomChop" on "cathdb"