CATH Domain: 1ukkA00 XML data for domain: 1ukkA00

Molscript image for 1ukkA00
1ukkA00
PDB coordinates for domain 1ukkA00

PDB 1ukk, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.300 GMP Synthetase; Chain A, domain 3
3.30.300.20 Gene3D
3.30.300.20.10
3.30.300.20.10.1
3.30.300.20.10.1.1
3.30.300.20.10.1.1.1
3.30.300.20.10.1.1.1.1

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Segment boundaries for domain 1ukkA00

Chopping figure for domain 1ukkA00
DomainStart PDB ResidueStop PDB Residue
1ukkA00 2 142

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.30.300.20.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2d7vB00 83.26 Vibrio choleraePutative uncharacterized protein 3.30.300.20 151 14 86 3.31 3.82
1lqlA02 81.47 Mycoplasma pneumoniaeUncharacterized protein MG427 homolog 3.30.300.20 103 16 69 1.83 2.62
2pn2A00 79.52 Psychrobacter arcticus 273-4Putative uncharacterized protein 3.30.300.20 129 10 90 3.87 4.28
2oplB01 79.06 Geobacter sulfurreducensPutative uncharacterized protein 3.30.300.20 154 14 73 3.44 4.69
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ukkA00
PVRKAKAVWEGGLRQGKGVELQSQAFQGPYSYPSRFEEGEGTNPEELIAAAHAGFSALAASLEREGFPPKRVSTEARVHL
EVVDGKPTLTRIELLTEAEVPGISSEKFLEIAEAAKEGCPVSRALAGVKEVVLTARLV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ukkA00
XPVRKAKAVWEGGLRQGKGVXELQSQAFQGPYSYPSRFEEGEGTNPEELIAAAHAGXFSXALAASLEREGFPPKRVSTEA
RVHLEVVDGKPTLTRIELLTEAEVPGISSEKFLEIAEAAKEGCPVSRALAGVKEVVLTARLV
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:59

Cut based on decision in database "DomChop" on "cathdb"