CATH Domain: 1ug6A00 XML data for domain: 1ug6A00

Molscript image for 1ug6A00
1ug6A00
PDB coordinates for domain 1ug6A00

PDB 1ug6, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.10
3.20.20.80.10.1
3.20.20.80.10.1.1
3.20.20.80.10.1.1.1
3.20.20.80.10.1.1.1.1

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Segment boundaries for domain 1ug6A00

Chopping figure for domain 1ug6A00
DomainStart PDB ResidueStop PDB Residue
1ug6A00 4 429

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.20.20.80.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3f5lA00 89.10 Zinc ion bindingPhenylpropanoid biosynthesisBeta-glucosidase 7Starch and sucrose metabolismBeta-glucosidase [EC:3.2.1.21] 3.20.20.80 472 37 90 2.22 2.47
1wcgA00 88.94 Brevicoryne brassicaeMyrosinase 1 3.20.20.80 462 31 90 2.05 2.27
1pbgA00 88.49 Lactococcus lactis subsp. lactis6-phospho-beta-galactosidase 3.20.20.80 452 33 91 1.98 2.16
1vffA00 87.69 Cyanoamino acid metabolismStarch and sucrose metabolismBeta-glucosidase [EC:3.2.1.21]Pyrococcus horikoshii423aa long hypothetical beta-glucosidase 3.20.20.80 423 34 92 2.02 2.19
1uwsA00 85.72 Galactose metabolismBeta-galactosidaseSulfolobus solfataricusBeta-galactosidase [EC:3.2.1.23]Other glycan degradation 3.20.20.80 483 29 83 2.45 2.94
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ug6A00
NAEKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAWPRI
LPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAFAFAEYAEAVARALADRVPFFATLN
EPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVDVADRYHNRFFL
DPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLYHLL
KRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRRFGL
YYVDFPSQRRIPKRSALWYRERIARA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ug6A00
MTENAEKFLWGVATSAYQIEGATQEDGRGPSIWDAFAQRPGAIRDGSTGEPACDHYRRYEEDIALMQSLGVRAYRFSVAW
PRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLALEERGGWRSRETAFAFAEYAEAVARALADRVPFFA
TLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARRVGIVLNFAPAYGEDPEAVDVADRYHNR
FFLDPILGKGYPESPFRDPPPVPILSRDLELVARPLDFLGVNYYAPVRVAPGTGTLPVRYLPPEGPATAMGWEVYPEGLY
HLLKRLGREVPWPLYVTENGAAYPDLWTGEAVVEDPERVAYLEAHVEAALRAREEGVDLRGYFVWSLMDNFEWAFGYTRR
FGLYYVDFPSQRRIPKRSALWYRERIARAQT
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:22

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"