CATH Domain: 1uekA01 XML data for domain: 1uekA01

Molscript image for 1uekA01
1uekA01
PDB coordinates for domain 1uekA01

PDB 1uek, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.230 Ribosomal Protein S5; domain 2
3.30.230.10 Gene3D
3.30.230.10.5
3.30.230.10.5.1
3.30.230.10.5.1.1
3.30.230.10.5.1.1.1
3.30.230.10.5.1.1.1.1

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Segment boundaries for domain 1uekA01

Chopping figure for domain 1uekA01
DomainStart PDB ResidueStop PDB Residue
1uekA01 1 148
1uekA02 149 268

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 3.30.230.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1h72C01 84.62 Methanocaldococcus jannaschiiHomoserine kinase 3.30.230.10 161 15 85 2.96 3.45
1kkhA01 81.42 Terpenoid backbone biosynthesisMethanocaldococcus jannaschiiMevalonate kinaseMevalonate kinase [EC:2.7.1.36]Metabolic pathways 3.30.230.10 181 15 77 2.75 3.53
2cz9A01 79.54 Amino sugar and nucleotide sugar metabolismGalactose metabolismProbable galactokinaseGalactokinase [EC:2.7.1.6]Pyrococcus horikoshii 3.30.230.10 174 16 81 3.62 4.44
1mg7A02 79.23 Caenorhabditis elegansXO lethal protein 1 3.30.230.10 157 7 75 3.07 4.05
2gs8A01 78.33 Terpenoid backbone biosynthesisMetabolic pathwaysDiphosphomevalonate decarboxylaseStreptococcus pyogenes serotype M1Diphosphomevalonate decarboxylase [EC:4.1.1.33] 3.30.230.10 165 10 85 4.06 4.75
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1uekA01
MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGLHFQGPYGRENLAYRAASLYLEAAGQPGGVRIL
LEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVDLFALARTLGADVPFFLLGRGAEARGVGERLKPLA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1uekA01
MERLAPAKVNLGLSVRFRREDGYHELHTLFAPFSLADRLVVEPVSSGLHFQGPYGRENLAYRAASLYLEAAGQPGGVRIL
LEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVDLFALARTLGADVPFFLLGRGAEARGVGERLKPLA
BLAST against CATH

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Domain History Events (4)

Domain assigned by lewis on 09 Jan 2007 13:16

Assigning domain 1uekA01 to 3.30.230.10 (as agreed with the CATH update team) after the chain has been rechopped. The reason is that the domain is very similar to the old domain 1uekA01 (from the previous chopping at "Sun Mar 5 17:48:10 2006") which was in 3.30.230.10 at the time the chain was unchopped.

Flow stage update by auto on 22 Dec 2006 19:34

All required files are present for Domain "1uekA01"

Flow stage update by auto on 22 Dec 2006 15:43

Beginning processing for Domain "1uekA01"

Insertion by cuff on 22 Dec 2006 14:42

small selection of choppings