CATH Domain: 1uebA02 XML data for domain: 1uebA02

Molscript image for 1uebA02
1uebA02
PDB coordinates for domain 1uebA02

PDB 1ueb, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.40 Beta Barrel
2.40.50 OB fold (Dihydrolipoamide Acetyltransferase, E2P)
2.40.50.140 Nucleic acid-binding proteins Gene3D
2.40.50.140.46
2.40.50.140.46.1
2.40.50.140.46.1.1
2.40.50.140.46.1.1.1
2.40.50.140.46.1.1.1.1

[top]
Segment boundaries for domain 1uebA02

Chopping figure for domain 1uebA02
DomainStart PDB ResidueStop PDB Residue
1uebA01 1 63
1uebA02 64 126
1uebA03 127 184

Structural Neighbourhood (35 entries)

There are 35 matching structural neighberhood comparisons for CATH ID 2.40.50.140.46.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 35 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1bkbA02 89.37 Pyrobaculum aerophilumTranslation initiation factor 5A 2.40.50.140 62 16 93 1.72 1.84
1hh2P02 85.96 N utilization substance protein AThermotoga maritima 2.40.50.140 63 9 85 1.81 2.11
2r7dA03 85.56 Exoribonuclease II [EC:3.1.13.1]Ribonuclease II family proteinDeinococcus radiodurans 2.40.50.140 59 6 84 2.14 2.54
2qgqA02 84.14 Thermotoga maritimaRibosomal protein S12 methylthiotransferase rimO 2.40.50.140 59 13 80 2.12 2.62
1k3rA02 83.73 Hypothetical proteinMethanothermobacter thermautotrophicus str. Delta HConserved protein 2.40.50.140 59 6 82 2.66 3.22
3d31A02 83.36 Methanosarcina acetivoransPutative sulfate transport system ATP-binding proteinSulfate/molybdate ABC transporter, ATP-binding proteinABC transporters 2.40.50.140 46 6 73 2.14 2.93
2ahoB01 82.04 Translation initiation factor eIF-2 alpha subunitSulfolobus solfataricusTranslation initiation factor 2 subunit alpha 2.40.50.140 80 12 76 2.59 3.40
3cp0A00 81.63 Corynebacterium glutamicumMembrane protein implicated in regulation of membrane protease activity 2.40.50.140 62 11 92 3.39 3.68
2p5zX04 81.55 Escherichia coli O6Putative uncharacterized protein 2.40.50.230 65 9 75 2.23 2.96
1uebA03 81.26 Thermus thermophilus HB8Elongation factor EF-PElongation factor P 2.40.50.140 58 12 74 3.14 4.21
2zteA01 81.10 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAMycobacterium tuberculosis 2.40.50.140 65 7 84 3.27 3.86
1g29102 80.79 Maltose transport protein MalKThermococcus litoralis 2.40.50.140 45 8 65 2.32 3.56
2ztdA01 80.44 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAMycobacterium tuberculosis 2.40.50.140 71 11 81 3.36 4.11
1cukA01 80.22 Homologous recombinationHolliday junction ATP-dependent DNA helicase ruvAHolliday junction DNA helicase RuvAEscherichia coli K-12 2.40.50.140 66 6 90 3.62 3.98
1oxxK02 80.10 ABC transporter, ATP binding protein (Glucose)Glucose/arabinose transport system ATP-binding proteinSulfolobus solfataricusABC transporters 2.40.50.140 45 8 65 2.00 3.07
1mhnA00 79.82 Survival motor neuron proteinSurvival motor neuron proteinHomo sapiensProtein binding 2.30.30.140 59 6 61 2.46 3.97
1sf9A02 79.75 Bacillus subtilisUncharacterized protein yfhH 2.30.30.340 54 11 61 3.05 4.93
1rl2A01 79.46 Geobacillus stearothermophilus50S ribosomal protein L2 2.40.50.140 55 7 63 2.27 3.58
1tucA00 79.12 Spectrin alpha chain, brainGallus gallusSpectrin alpha 2.30.30.40 61 11 84 4.11 4.89
2jqoA01 78.84 Bacillus subtilisUncharacterized protein yobA 2.40.50.140 88 9 69 3.14 4.53
1mmdA01 78.51 ActomyosinMyosin II complexActin-myosin filament slidingProtein localizationActin filament binding 2.30.30.360 48 4 58 2.02 3.44
1x6bA01 78.34 Rho guanine nucleotide exchange factor 16Homo sapiens 2.30.30.40 64 7 60 3.01 4.94
1c0mA02 78.25 Rous sarcoma virus - Prague CPol polyprotein 2.30.30.10 54 9 61 3.07 4.96
1pfsA00 78.09 DNA-Binding protein G5PPseudomonas phage Pf3 2.40.50.140 78 1 69 3.24 4.68
2khiA00 77.84 RibosomeSmall subunit ribosomal protein S130S ribosomal protein S1MembraneEscherichia coli K-12 2.40.50.140 95 6 65 2.93 4.49
2heqA01 77.39 Bacillus subtilisSPBc2 prophage-derived uncharacterized protein yorP 2.30.30.40 54 9 58 2.29 3.90
2qw7C00 77.07 Carbon dioxide concentrating mechanism protein CcmLCarbon dioxide concentrating mechanism protein ccmLSynechocystis sp. PCC 6803 2.40.50.220 94 7 57 2.84 4.94
2o9sA00 76.83 Sorbin and SH3 domain containing 1PPAR signaling pathwayInsulin signaling pathwayNucleusActin binding 2.30.30.40 67 7 62 3.05 4.87
1ckmA02 76.72 Paramecium bursaria Chlorella virus 1MRNA-capping enzyme 2.40.50.140 83 4 63 3.08 4.82
1ib8A02 75.83 Hypothetical proteinRibosome maturation factor rimPStreptococcus pneumoniae 2.30.30.180 67 12 62 2.99 4.77
1dgsA04 75.78 DNA ligaseThermus filiformis 2.40.50.140 73 4 71 3.47 4.87
1nnxA00 75.26 Escherichia coli O157:H7Protein ygiW 2.40.50.200 93 12 63 2.97 4.68
1vq8A01 74.12 Ribosome50S ribosomal protein L2PHaloarcula marismortuiLarge subunit ribosomal protein L2 2.40.50.140 78 4 50 2.07 4.14
1b3qA04 73.84 Thermotoga maritimaBacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Protein binding 2.40.50.180 63 11 87 4.23 4.85
1m9sA05 71.07 Internalin BListeria monocytogenesProtein bindingInternalin B 2.30.30.170 78 1 47 2.30 4.85
[1]
Displaying entries 1 to 35 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1uebA02
YVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVGAEFFKEGMTALGDMYEGQPIKVTPPT
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1uebA02
YVETRELQYLYPEGEEMVFMDLETYEQFAVPRSRVVGAEFFKEGMTALGDMYEGQPIKVTPPT
BLAST against CATH

[top]
Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:58

Cut based on decision in database "DomChop" on "cathdb"