CATH Domain: 1ualA01 XML data for domain: 1ualA01

Molscript image for 1ualA01
1ualA01
PDB coordinates for domain 1ualA01

PDB 1ual, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.1280 Alpha/beta knot
3.40.1280.10 Gene3D
3.40.1280.10.1
3.40.1280.10.1.1
3.40.1280.10.1.1.1
3.40.1280.10.1.1.1.1
3.40.1280.10.1.1.1.1.1

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Segment boundaries for domain 1ualA01

Chopping figure for domain 1ualA01
DomainStart PDB ResidueStop PDB Residue
1ualA01 -1 160
1ualA02 170 250

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 3.40.1280.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1vh0A00 78.97 Hypothetical proteinRibosomal RNA large subunit methyltransferase HStaphylococcus aureus 3.40.1280.10 157 11 83 3.41 4.06
1o6dA00 77.02 Hypothetical proteinThermotoga maritimaRibosomal RNA large subunit methyltransferase H 3.40.1280.10 147 10 85 4.03 4.73
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ualA01
SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA
GEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPG
VL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ualA01
SHMWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAA
GEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPG
VL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:47

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"