CATH Domain: 1u7lA03 XML data for domain: 1u7lA03

Molscript image for 1u7lA03
1u7lA03
PDB coordinates for domain 1u7lA03

PDB 1u7l, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.100 Gene3D
3.30.70.100.11
3.30.70.100.11.1
3.30.70.100.11.1.1
3.30.70.100.11.1.1.1
3.30.70.100.11.1.1.1.1

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Segment boundaries for domain 1u7lA03

Chopping figure for domain 1u7lA03
DomainStart PDB ResidueStop PDB Residue
1u7lA01 5 49
1u7lA01 323 392
1u7lA02 50 171
1u7lA02 262 322
1u7lA03 172 261

Structural Neighbourhood (77 entries)

There are 77 matching structural neighberhood comparisons for CATH ID 3.30.70.100.11.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 77 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ce8A00 83.09 Shewanella baltica OS155Putative uncharacterized protein 3.30.70.120 87 9 76 2.70 3.52
1nh8A03 82.77 Histidine metabolismMetabolic pathwaysATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Mycobacterium tuberculosis 3.30.70.120 67 5 72 2.11 2.92
1vi7A02 82.45 IMPACT family member yigZProtein bindingEscherichia coli K-12 3.30.70.240 71 15 72 2.12 2.94
2vd3A03 81.74 Methanothermobacter thermautotrophicus str. Delta HATP phosphoribosyltransferaseATP phosphoribosyltransferase [EC:2.4.2.17]Histidine metabolismMetabolic pathways 3.30.70.120 74 6 72 2.20 3.05
1xtzA02 81.56 Identical protein bindingNucleusRibose-5-phosphate isomerasePyridoxine biosynthetic processRibose 5-phosphate isomerase A [EC:5.3.1.6] 3.30.70.260 84 3 78 3.44 4.36
1lfpA03 81.14 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 5 73 2.67 3.64
3bzqA00 81.02 Two-component systemNitrogen regulatory protein P-II 1Nitrogen regulatory protein P-IIMycobacterium tuberculosis 3.30.70.120 99 11 69 2.37 3.40
2nzcA00 80.85 Thermotoga maritimaPutative uncharacterized protein 3.30.70.1150 77 5 77 3.05 3.92
1darA05 80.84 Thermus thermophilus HB8Elongation factor GElongation factor EF-G [EC:3.6.5.3] 3.30.70.240 87 10 75 2.41 3.19
1u7lA01 80.63 V-type H+-transporting ATPase subunit C [EC:3.6.3.14]Oxidative phosphorylationVacuolar acidificationProtein bindingVacuolar proton-transporting V-type ATPase, V1 domain 3.30.70.1180 91 10 78 3.19 4.09
2f1fA01 80.37 Valine, leucine and isoleucine biosynthesisMetabolic pathwaysButanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesis 3.30.70.260 79 8 77 2.59 3.33
2nyiA02 80.30 3.30.70.260 89 10 78 3.26 4.13
2gx8C02 80.26 Bacillus cereus ATCC 14579NIF3-related protein 3.30.70.830 102 10 73 3.00 4.08
2rhsD06 79.96 Aminoacyl-tRNA biosynthesisStaphylococcus haemolyticus JCSC1435Phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chain 3.30.70.380 88 9 72 2.53 3.50
1u8sA01 79.71 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 86 3 76 2.92 3.81
1jqgA01 79.66 Carboxypeptidase AHelicoverpa armigera 3.30.70.340 91 8 74 3.56 4.76
2qmxA03 79.51 Prephenate dehydratase [EC:4.2.1.51]Phenylalanine, tyrosine and tryptophan biosynthesisChlorobaculum tepidumMetabolic pathwaysPrephenate dehydratase 3.30.70.260 90 11 83 3.79 4.55
1yjrA00 79.35 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Cellular copper ion homeostasisTrans-Golgi network 3.30.70.100 75 9 74 2.82 3.79
1o8bA02 79.02 Pentose phosphate pathwayMetabolic pathwaysRibose 5-phosphate isomerase A [EC:5.3.1.6]Escherichia coli K-12Ribose-5-phosphate isomerase A 3.30.70.260 69 11 73 3.49 4.76
1nzaA00 78.97 Thermus thermophilus HB8Divalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 103 7 66 2.44 3.64
2nuhA00 78.93 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 4 67 2.67 3.97
1q5yD00 78.90 CopG family transcriptional regulator, nickel-responsive regulatorNickel-responsive regulatorProtein bindingEscherichia coli K-12 3.30.70.1150 80 8 80 3.91 4.89
2qmwA03 78.76 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysPrephenate dehydratase [EC:4.2.1.51]Similar to chorismate mutaseStaphylococcus aureus subsp. aureus Mu50 3.30.70.260 73 8 74 2.81 3.77
1u0sA00 78.60 Thermotoga maritimaBacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Protein binding 3.30.70.1110 86 10 72 2.77 3.84
1y7pB01 78.51 Archaeoglobus fulgidusUncharacterized protein AF_1403 3.30.70.260 80 8 80 3.26 4.08
1mwyA00 78.27 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]Detoxification of zinc ionLead, cadmium, zinc and mercury-transporting ATPaseEscherichia coli K-12Response to cadmium ion 3.30.70.100 73 8 73 3.04 4.15
1mlaA01 78.18 Fatty acid biosynthesisMetabolic pathwaysMalonyl CoA-acyl carrier protein transacylase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Escherichia coli K-12 3.30.70.250 73 8 73 2.69 3.67
1u8sA02 78.07 Glycine cleavage system transcriptional repressor, putativeGlycine cleavage system transcriptional repressorVibrio cholerae 3.30.70.260 84 7 73 3.44 4.69
2g9oA00 78.06 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Trans-Golgi networkCellular copper ion homeostasis 3.30.70.100 77 15 73 2.95 4.02
1vr6A01 77.93 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.30.70.1140 75 5 76 3.06 3.99
1dtjA00 77.83 RNA-binding protein Nova-2Homo sapiens 3.30.1370.10 74 8 68 3.35 4.86
3cedA00 77.79 ABC transportersD-methionine transport system ATP-binding proteinMethionine import ATP-binding protein MetN 2Staphylococcus aureus subsp. aureus Mu50 3.30.70.260 97 8 85 3.88 4.53
2x3dF01 77.73 Hypothetical proteinSulfolobus solfataricusPutative uncharacterized protein 3.30.70.1340 84 10 76 3.13 4.08
2nyiA01 77.73 3.30.70.260 77 12 75 3.70 4.90
2fgcA03 77.62 Butanoate metabolismC5-Branched dibasic acid metabolismPantothenate and CoA biosynthesisValine, leucine and isoleucine biosynthesisMetabolic pathways 3.30.70.1150 74 12 71 2.98 4.19
1eayD00 77.50 Bacterial chemotaxisTwo-component systemTwo-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]Escherichia coli K-12Chemotaxis protein cheA 3.30.70.400 69 7 71 2.87 4.04
1zpvB00 77.40 ACT domain-containing proteinUPF0237 protein SP_0238Streptococcus pneumoniae 3.30.70.260 81 8 74 3.66 4.92
2do0A01 77.36 Protein domain specific bindingIntegral to plasma membraneParaspecklesAlternative nuclear mRNA splicing, via spliceosomeHeterogeneous nuclear ribonucleoprotein M 3.30.70.330 76 11 72 3.18 4.40
1yx2A02 77.30 Nitrogen metabolismAminomethyltransferase [EC:2.1.2.10]One carbon pool by folateBacillus subtilisGlycine, serine and threonine metabolism 3.30.70.1400 81 7 66 2.87 4.30
1earA02 77.26 Sporosarcina pasteuriiUrease accessory protein ureE 3.30.70.790 69 2 65 3.25 4.96
2hiyB01 77.22 Streptococcus pneumoniaePutative uncharacterized protein 3.30.70.1280 87 4 70 3.07 4.39
1gmuA01 77.14 Klebsiella aerogenesUrease accessory protein ureE 3.30.70.790 67 4 63 2.64 4.17
1uw4A00 77.13 Regulator of nonsense transcripts 3BNuclear-transcribed mRNA catabolic process, nonsense-mediated decayHomo sapiensProtein binding 3.30.70.330 90 8 75 3.29 4.35
2ywwA01 77.08 Pyrimidine metabolismMethanocaldococcus jannaschiiAspartate carbamoyltransferase regulatory subunitAlanine, aspartate and glutamate metabolismAspartate carbamoyltransferase regulatory chain 3.30.70.140 91 4 76 3.52 4.58
1vlyA02 76.98 RNA modificationTRNA-modifying protein ygfZFolic acid bindingEscherichia coli K-12 3.30.70.1400 84 3 70 3.01 4.30
1utaA00 76.93 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 5 76 3.13 4.08
1kr4A00 76.90 Thermotoga maritimaDivalent-cation tolerance protein cutAPeriplasmic divalent cation tolerance protein 3.30.70.830 107 4 66 2.90 4.37
1nu4A00 76.86 U1 small nuclear ribonucleoprotein ASpliceosomeSpliceosomal complexHomo sapiensProtein binding 3.30.70.330 91 5 76 3.58 4.65
2rilA00 76.84 Antibiotic biosynthesis monooxygenaseShewanella loihica PV-4 3.30.70.900 91 4 79 3.95 4.99
1y3jA00 76.84 Cu2+-exporting ATPase [EC:3.6.3.4]Copper-dependent protein bindingCopper-transporting ATPase 1Cellular copper ion homeostasisTrans-Golgi network 3.30.70.100 77 10 73 2.93 4.00
2pehA01 76.83 Splicing factor 45SpliceosomeHomo sapiensProtein bindingSplicing factor 45 3.30.70.330 83 9 76 2.88 3.76
1wj9A01 76.79 Thermus thermophilus HB8Putative uncharacterized protein TTHB192 3.30.70.1200 87 3 75 3.14 4.16
1b7yB06 76.63 Aminoacyl-tRNA biosynthesisPhenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]Phenylalanyl-tRNA synthetase beta chainThermus thermophilus 3.30.70.380 86 11 72 3.52 4.87
1in0A01 76.59 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 10 68 2.56 3.72
2qfjA02 76.58 Homo sapiensPoly(U)-binding-splicing factor PUF60Protein binding 3.30.70.330 87 5 71 3.13 4.40
2hzcA00 76.54 Splicing factor U2AF 65 kDa subunitSpliceosomeSpliceosomal complexSplicing factor U2AF 65 kDa subunitEnzyme binding 3.30.70.330 87 4 75 3.31 4.38
1cvjA01 76.37 Poly(A) RNA bindingTranslation activator activityProtein C-terminus bindingMRNA polyadenylationPolyadenylate-binding protein 1 3.30.70.330 77 6 67 2.56 3.78
2bopA00 76.34 Regulatory protein E2Bovine papillomavirus type 1 3.30.70.330 85 4 74 3.22 4.33
2ivyA01 76.17 Sulfolobus solfataricusPutative uncharacterized protein 3.30.70.240 74 6 65 3.19 4.87
1x5uA01 76.14 SpliceosomeSpliceosomal complexHomo sapiensSplicing factor 3B subunit 4Splicing factor 3B subunit 4 3.30.70.330 80 10 73 3.12 4.25
1nm2A01 76.07 Fatty acid biosynthesisStreptomyces coelicolorMalonyl CoA:acyl carrier protein malonyltransferase[acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]Metabolic pathways 3.30.70.250 68 5 72 3.53 4.89
1jmtA00 75.98 Spliceosomal complexSplicing factor U2AF 35 kDa subunitCajal bodyHomo sapiensProtein binding 3.30.70.330 98 5 70 3.44 4.89
1r8hA00 75.91 Human papillomavirus type 6aRegulatory protein E2 3.30.70.330 87 8 80 3.63 4.54
1harA02 75.47 Human immunodeficiency virus type 1 BH10Gag-Pol polyprotein 3.30.70.270 69 7 65 3.03 4.62
1fjeB02 75.44 NucleolinMesocricetus auratus 3.30.70.330 84 4 81 3.84 4.73
2qswA00 75.22 D-methionine transport system ATP-binding proteinMethionine import ATP-binding protein MetN 2ABC transportersEnterococcus faecalis 3.30.70.260 82 8 85 4.18 4.89
1fxlA01 75.19 AU-rich element bindingELAV like protein 2/3/4MRNA processingHomo sapiensELAV-like protein 4 3.30.70.330 71 8 68 3.35 4.86
2u2fA00 75.15 Splicing factor U2AF 65 kDa subunitSpliceosomeSpliceosomal complexSplicing factor U2AF 65 kDa subunitEnzyme binding 3.30.70.330 85 5 76 3.47 4.53
2kt2A00 75.06 Mercuric reductasePseudomonas aeruginosaMercuric reductase [EC:1.16.1.1] 3.30.70.100 69 11 70 3.33 4.76
2epiB00 75.01 Methanocaldococcus jannaschiiUPF0045 protein MJ1052 3.30.70.930 96 3 66 3.15 4.72
1jx4A02 74.87 DNA polymerase IV (archaeal DinB-like DNA polymerase) [EC:2.7.7.7]DNA polymerase IVSulfolobus solfataricus 3.30.70.270 96 3 62 2.93 4.69
1s99A01 74.85 Bacillus subtilisPutative HMP/thiamine-binding protein ykoF 3.30.70.930 77 6 68 2.96 4.30
1d8zA00 73.67 Mus musculusAU-rich element bindingELAV like protein 2/3/4ELAV-like protein 3 3.30.70.330 89 7 74 3.67 4.93
2od4B01 73.45 3.30.70.900 81 11 74 3.69 4.96
1lfwA02 72.87 Lactobacillus delbrueckii subsp. lactisBeta-Ala-Xaa dipeptidase 3.30.70.360 106 6 66 2.92 4.42
1uv7A00 72.76 Vibrio choleraeGeneral secretion pathway protein M 3.30.1360.100 74 6 61 2.74 4.48
2errA01 72.62 Fox-1 homolog AProtein C-terminus bindingHomo sapiensTrans-Golgi network 3.30.70.330 83 6 72 3.35 4.64
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Displaying entries 1 to 77 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1u7lA03
VRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAR
EKKFIPREFN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1u7lA03
VRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAR
EKKFIPREFN
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:57

Cut based on decision in database "DomChop" on "cathdb"