Domain assigned by auto on 15 Aug 2007 08:49
Assigning to "3.70.10.10" based on similarity with "1vyjA00"
| CATH Code | Level Description | Links |
|---|---|---|
3
| Alpha Beta | |
3.70
| Box | |
3.70.10
| Proliferating Cell Nuclear Antigen | |
3.70.10.10
| Gene3D | |
3.70.10.10.5
| ||
3.70.10.10.5.1
| ||
3.70.10.10.5.1.1
| ||
3.70.10.10.5.1.1.1
| ||
3.70.10.10.5.1.1.1.1
|
There are 6 matching structural neighberhood comparisons for CATH ID 3.70.10.10.5.1.1.1.1 (SIMAX score < 5)
| Match Depth | Match | SSAP score | Match Keywords | Match Superfamily | Length | Sequence Id | Overlap | RMSD | SIMAX |
|---|---|---|---|---|---|---|---|---|---|
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1plqA00 | 90.20 | 3.70.10.10 | 258 | 35 | 96 | 1.38 | 1.42 | |
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1sxjH02 | 78.44 | 3.10.150.10 | 125 | 33 | 48 | 1.13 | 2.32 | |
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1b77A00 | 77.96 | 3.70.10.10 | 228 | 7 | 82 | 3.43 | 4.16 | |
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1vpkA03 | 74.95 | 3.10.150.10 | 119 | 10 | 44 | 1.98 | 4.48 | |
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3d1gA03 | 74.34 | 3.10.150.10 | 119 | 11 | 44 | 2.18 | 4.89 | |
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1vpkA01 | 72.72 | 3.10.150.10 | 119 | 8 | 40 | 1.99 | 4.90 |
>pdb|1u7bA00 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILK CAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVI SCAKDGVKFSASGELGNGNIKLSQTSEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADM GHLKYYLAPKI
Assigning to "3.70.10.10" based on similarity with "1vyjA00"
No in_process hits for Domain "1u7bA00" ready to be processed
Domain "1u7bA00" hits Domain "1u76C00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1u76A00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vymC00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vymB00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vymA00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjI00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjE00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjG00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjK00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjA00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1vyjC00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1ul1B00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1ul1A00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1ul1C00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1axcE00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1axcA00" (100% over 100%) which is currently in process
Domain "1u7bA00" hits Domain "1u76E00" (100% over 100%) which is currently in process
NW result present for Domain "1u7bA00"
All required files are present for Domain "1u7bA00"
Beginning processing for Domain "1u7bA00"
Final ChopClose added based on similarity with "1axcA"