CATH Domain: 1u2kA01 XML data for domain: 1u2kA01

Molscript image for 1u2kA01
1u2kA01
PDB coordinates for domain 1u2kA01

PDB 1u2k, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.520 Peroxidase; domain 1
1.10.520.10 Gene3D
1.10.520.10.5
1.10.520.10.5.3
1.10.520.10.5.3.1
1.10.520.10.5.3.1.1
1.10.520.10.5.3.1.1.1

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Segment boundaries for domain 1u2kA01

Chopping figure for domain 1u2kA01
DomainStart PDB ResidueStop PDB Residue
1u2kA01 435 573
1u2kA01 702 726
1u2kA02 574 701

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 1.10.520.10.5.3.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1itkA01 84.59 Haloarcula marismortuiCatalase-peroxidase 2 1.10.520.10 142 27 71 2.25 3.16
1mwvA01 84.32 Catalase/peroxidase [EC:1.11.1.6 1.11.1.7]Burkholderia pseudomalleiMethane metabolismCatalase-peroxidasePhenylalanine metabolism 1.10.520.10 200 23 78 3.15 4.04
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1u2kA01
QDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLE
KIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEAHEKFVKDFVAAWVKVMNLDR
FDLL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1u2kA01
QDPLPQPIYNPTEQDIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVRALPVLE
KIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEAHEKFVKDFVAAWVKVMNLDR
FDLL
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 19:39

Assigning to "1.10.520.10" based on similarity with "1itkB03" (NWSI: 51.219512195122, NWO: 94.6107784431138, SPS: 91.94, SPO: 94, RMSD: 3.91)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1u2kA01"

Flow stage update by auto on 28 Apr 2006 17:45

All required files are present for Domain "1u2kA01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1u2kA01"

Insertion by auto on 05 Mar 2006 23:57

Cut based on decision in database "DomChop" on "cathdb"