CATH Domain: 1tvkA03 XML data for domain: 1tvkA03

Molscript image for 1tvkA03
1tvkA03
PDB coordinates for domain 1tvkA03

PDB 1tvk, Chain A, Domain 3

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.287 Helix Hairpins
1.10.287.600 Helix hairpin bin Gene3D
1.10.287.600.1
1.10.287.600.1.1
1.10.287.600.1.1.1
1.10.287.600.1.1.1.1
1.10.287.600.1.1.1.1.1

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Segment boundaries for domain 1tvkA03

Chopping figure for domain 1tvkA03
DomainStart PDB ResidueStop PDB Residue
1tvkA01 2 268
1tvkA02 269 383
1tvkA03 384 439

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 1.10.287.600.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1tvkB03 92.60 Gap junctionPathogenic Escherichia coli infectionTubulin betaBos taurusTubulin beta-2B chain 1.10.287.600 54 40 96 0.92 0.95
1skvA00 82.55 Protein D-63Sulfolobus virus 1 1.10.287.660 62 1 79 2.87 3.63
1nt2B02 82.43 Archaeoglobus fulgidusProtein bindingPutative uncharacterized protein 1.10.287.660 67 12 79 3.58 4.53
1wb7A01 81.97 Superoxide dismutase, Fe-Mn family [EC:1.15.1.1]Sulfolobus solfataricusSuperoxide dismutase [Fe] 1.10.287.990 67 5 76 2.39 3.14
1b04A03 80.80 Geobacillus stearothermophilusDNA ligase 1.10.287.610 62 8 74 3.50 4.72
3csxA00 79.16 Cyanothece sp. ATCC 51142DUF683-containing protein 1.10.287.660 61 7 86 4.05 4.66
2be3A02 78.45 Purine metabolismPutative GTP pyrophosphokinase [EC:2.7.6.5]Streptococcus pneumoniaePutative uncharacterized protein 1.10.287.860 55 16 76 2.96 3.85
2oyqA04 77.86 DNA polymeraseEnterobacteria phage RB69 1.10.287.690 49 4 82 3.97 4.83
1bsmA01 76.62 Superoxide dismutase [Mn/Fe]Propionibacterium freudenreichii subsp. shermanii 1.10.287.990 64 7 70 3.37 4.79
2e5yA02 75.67 ATP synthase epsilon chainBacillus sp. PS3 1.20.5.440 45 8 73 3.01 4.11
2fl4A01 66.83 Arginine and proline metabolismSpermine/spermidine acetyltransferase, putativeDiamine N-acetyltransferase [EC:2.3.1.57]Metabolic pathwaysEnterococcus faecalis 1.10.287.900 43 2 30 0.66 2.17
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1tvkA03
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1tvkA03
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:33

HomCheck 'Assigned T' domains

Flow stage update by sillitoe on 06 Mar 2006 15:33

HomCheck 'Assigned T' domains

Insertion by auto on 05 Mar 2006 23:55

Cut based on decision in database "DomChop" on "cathdb"