CATH Domain: 1toaA02 XML data for domain: 1toaA02

Molscript image for 1toaA02
1toaA02
PDB coordinates for domain 1toaA02

PDB 1toa, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1980 Nitrogenase molybdenum iron protein domain Gene3D
3.40.50.1980.6
3.40.50.1980.6.1
3.40.50.1980.6.1.1
3.40.50.1980.6.1.1.1
3.40.50.1980.6.1.1.1.1

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Segment boundaries for domain 1toaA02

Chopping figure for domain 1toaA02
DomainStart PDB ResidueStop PDB Residue
1toaA01 32 174
1toaA02 177 307

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.40.50.1980.6.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3hh8A02 91.14 Iron/zinc/copper transport system substrate-binding proteinMetal ABC transporter substrate-binding lipoproteinStreptococcus pyogenes serotype M1ABC transporters 3.40.50.1980 131 25 96 1.50 1.56
1pq4A02 85.59 Periplasmic binding protein component of an ABC type zinc uptake transporterZinc transport system substrate-binding proteinABC transportersSynechocystis sp. PCC 6803 3.40.50.1980 103 20 78 1.86 2.37
3cx3A02 83.92 ABC transportersLipoproteinZinc transport system substrate-binding proteinStreptococcus pneumoniae R6 3.40.50.1980 107 26 80 1.85 2.29
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1toaA02
LDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNV
EALRDAVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1toaA02
LDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFIESSIPHKNV
EALRDAVQARGHVVQIGGELFSDAMGDAGTSEGTYVGMVTHNIDTIVAALA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:22

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:46

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"