CATH Domain: 1thfD00 XML data for domain: 1thfD00

Molscript image for 1thfD00
1thfD00
PDB coordinates for domain 1thfD00

PDB 1thf, Chain D, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.70 Aldolase class I Gene3D
3.20.20.70.14
3.20.20.70.14.1
3.20.20.70.14.1.1
3.20.20.70.14.1.1.1
3.20.20.70.14.1.1.1.1

Segment boundaries for domain 1thfD00

Chopping figure for domain 1thfD00
DomainStart PDB ResidueStop PDB Residue
1thfD00 1 253

Structural Neighbourhood (27 entries)

There are 27 matching structural neighberhood comparisons for CATH ID 3.20.20.70.14.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 27 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1jvnA02 85.77 Histidine biosynthetic processGlutamine amidotransferase [EC:2.4.2.-]Purine nucleoside monophosphate biosynthetic processHistidine metabolismMetabolic pathways 3.20.20.70 296 44 81 2.66 3.25
2w79A00 83.63 Histidine metabolismMetabolic pathwaysThermotoga maritima1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerasePhosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] 3.20.20.70 241 17 85 2.26 2.63
1xi3A00 80.12 Pyrococcus furiosusThiamine metabolismThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 202 15 75 3.60 4.77
3f4wA00 80.08 Pentose and glucuronate interconversionsMethane metabolismPutative hexulose 6 phosphate synthaseSalmonella enterica subsp. enterica serovar Typhimurium3-hexulose-6-phosphate synthase [EC:4.1.2.43] 3.20.20.70 211 14 79 3.04 3.81
2tpsB00 79.48 Thiamine metabolismBacillus subtilisThiamine-phosphate pyrophosphorylaseThiamine-phosphate pyrophosphorylase [EC:2.5.1.3]Metabolic pathways 3.20.20.70 226 15 79 3.68 4.63
1ub3A00 79.18 Thermus thermophilus HB8Deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 211 14 73 3.21 4.34
2fliC00 79.00 Pentose phosphate pathwayPentose and glucuronate interconversionsMetabolic pathwaysRibulose-phosphate 3-epimerase [EC:5.1.3.1]Streptococcus pyogenes serotype M1 3.20.20.70 219 12 81 3.48 4.29
1rd5A00 78.72 Indole-3-glycerol-phosphate lyase [EC:4.1.2.8]Indole-3-glycerol phosphate lyase, chloroplasticBenzoxazinoid biosynthesisZea maysMetabolic pathways 3.20.20.70 261 13 79 3.26 4.11
3ldvA00 78.54 Pyrimidine metabolismMetabolic pathwaysVibrio choleraeOrotidine 5'-phosphate decarboxylaseOrotidine-5'-phosphate decarboxylase [EC:4.1.1.23] 3.20.20.70 231 7 79 3.73 4.69
1w0mA00 78.51 Thermoproteus tenaxTriosephosphate isomerase 3.20.20.70 225 14 78 3.90 4.96
1q6oB00 78.41 Ascorbate and aldarate metabolism3-keto-L-gulonate-6-phosphate decarboxylase ulaDMagnesium ion binding3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]3-dehydro-L-gulonate-6-phosphate decarboxylase activity 3.20.20.70 215 10 80 3.14 3.89
1twdB00 77.99 Shigella flexneriCopper homeostasis proteinCopper homeostasis protein cutC 3.20.20.380 226 11 75 3.35 4.41
1nvmA01 77.23 Pseudomonas sp. CF6004-hydroxy-2-oxovalerate aldolase 3.20.20.70 270 11 81 3.75 4.60
1nsjA00 77.21 Thermotoga maritimaN-(5'-phosphoribosyl)anthranilate isomerasePhenylalanine, tyrosine and tryptophan biosynthesisPhosphoribosylanthranilate isomerase [EC:5.3.1.24]Metabolic pathways 3.20.20.70 205 15 76 3.31 4.32
1wa3D00 76.81 Thermotoga maritimaArginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolism 3.20.20.70 203 12 75 3.37 4.49
1vcvA00 76.76 Pyrobaculum aerophilumProbable deoxyribose-phosphate aldolasePentose phosphate pathwayDeoxyribose-phosphate aldolase [EC:4.1.2.4] 3.20.20.70 226 11 71 3.22 4.48
2p10C01 76.62 Mesorhizobium lotiMll9387 protein 3.20.20.70 233 10 69 3.36 4.80
1wbhB00 76.13 Arginine and proline metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysPentose and glucuronate interconversionsPentose phosphate pathway 3.20.20.70 214 11 74 3.34 4.49
1piiA02 76.07 Phenylalanine, tyrosine and tryptophan biosynthesisTryptophan biosynthesis protein trpCFIndole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]Phosphoribosylanthranilate isomerase activityIndole-3-glycerol-phosphate synthase activity 3.20.20.70 190 11 72 3.55 4.88
1w8sE00 75.66 Thermoproteus tenaxFructose-bisphosphate aldolase class 1 3.20.20.70 252 14 80 3.95 4.92
1vkfA00 75.65 Thermotoga maritimaGlycerol uptake operon antiterminatorGlycerol uptake operon antiterminator-related protein 3.20.20.400 168 15 64 2.75 4.27
1x7fA01 75.23 Outer surface proteinBacillus cereus ATCC 14579 3.20.20.70 228 5 74 3.61 4.83
2yw3E00 75.02 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysThermus thermophilus HB8 3.20.20.70 198 16 72 3.42 4.70
1qwgA00 74.76 Phosphosulfolactate synthasePhosphosulfolactate synthase [EC:4.4.1.19]Methanocaldococcus jannaschii 3.20.20.70 251 9 80 3.90 4.84
1vhcF00 74.72 Arginine and proline metabolism2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysHaemophilus influenzae 3.20.20.70 209 11 73 3.64 4.95
1vr6A02 74.70 Phenylalanine, tyrosine and tryptophan biosynthesisMetabolic pathwaysThermotoga maritima3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]Phospho-2-dehydro-3-deoxyheptonate aldolase 3.20.20.70 268 14 77 3.74 4.84
3gvgA00 73.68 Glycolysis / GluconeogenesisFructose and mannose metabolismMetabolic pathwaysInositol phosphate metabolismTriosephosphate isomerase (TIM) [EC:5.3.1.1] 3.20.20.70 247 6 78 3.66 4.65
Displaying entries 1 to 27 (page 1 of 1)


Domain ATOM Sequence

>pdb|1thfD00
MLAKRIIACLDVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVG
GGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV
EKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEY
LKKHGVNVRLEGL    

Domain COMBS Sequence

>pdb|1thfD00
MLAKRIIACLDVKDGRVVKGSNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVG
GGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEV
EKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKEY
LKKHGVNVRLEGL    

Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:55

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:55

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:19

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"