CATH Domain: 1tc3C00 XML data for domain: 1tc3C00

Molscript image for 1tc3C00
1tc3C00
PDB coordinates for domain 1tc3C00

PDB 1tc3, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.10 Arc Repressor Mutant, subunit A
1.10.10.60 Homeodomain-like Gene3D
1.10.10.60.45
1.10.10.60.45.1
1.10.10.60.45.1.1
1.10.10.60.45.1.1.1
1.10.10.60.45.1.1.1.1

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Segment boundaries for domain 1tc3C00

Chopping figure for domain 1tc3C00
DomainStart PDB ResidueStop PDB Residue
1tc3C00 202 252

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 1.10.10.60.45.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1gdtB03 86.68 Transposon gamma-delta resolvaseEscherichia coli K-12 1.10.10.60 45 8 88 4.20 4.76
1o4xA02 86.53 Sequence-specific DNA binding transcription factor activityPOU domain transcription factor, class 2Negative regulation of transcription, DNA-dependentSequence-specific DNA bindingTranscription repressor activity 1.10.10.60 53 13 88 4.27 4.82
2hyjA01 83.60 Streptomyces coelicolorPutative tetR-family transcriptional regulator 1.10.10.60 46 6 74 2.74 3.68
2k9nA02 83.55 MYB24Trichomonas vaginalis 1.10.10.60 54 17 88 3.82 4.30
1fexA00 82.17 Protein bindingTelomeric repeat-binding factor 2-interacting protein 1Protection from non-homologous end joining at telomereNegative regulation of telomere maintenanceCytoplasm 1.10.10.60 59 9 79 2.89 3.63
2raeA01 81.54 Rhodococcus jostii RHA1Transcriptional regulator, AcrR family protein 1.10.10.60 43 11 76 2.91 3.81
1zkgA01 80.84 Thermotoga maritimaTranscriptional regulator, TetR family 1.10.10.60 46 13 82 3.78 4.59
1ignA01 76.43 Chromatin silencing at telomereProtein bindingMyb-like DNA-binding protein RAP1Protection from non-homologous end joining at telomereDNA-binding protein RAP1 1.10.10.60 93 7 51 2.30 4.46
2jn6A01 75.44 Corynebacterium glutamicumPutative uncharacterized protein Cgl2762 1.10.10.60 85 9 52 2.31 4.36
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1tc3C00
PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGTS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1tc3C00
PRGSALSDTERAQLDVMKLLNVSLHEMSRKISRSRHCIRVYLKDPVSYGTS
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:03

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 14:24

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"