CATH Domain: 1ta3A00 XML data for domain: 1ta3A00

Molscript image for 1ta3A00
1ta3A00
PDB coordinates for domain 1ta3A00

PDB 1ta3, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.80 Glycosidases Gene3D
3.20.20.80.67
3.20.20.80.67.1
3.20.20.80.67.1.1
3.20.20.80.67.1.1.1
3.20.20.80.67.1.1.1.1

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Segment boundaries for domain 1ta3A00

Chopping figure for domain 1ta3A00
DomainStart PDB ResidueStop PDB Residue
1ta3A00 1 274

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.20.20.80.67.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1eokA00 79.09 Endo-beta-N-acetylglucosaminidase F3Elizabethkingia meningoseptica 3.20.20.80 282 14 84 4.03 4.80
1edtA00 78.06 Endo-beta-N-acetylglucosaminidase HStreptomyces plicatus 3.20.20.80 265 12 82 3.28 3.98
3fndA01 77.88 ChitinaseBacteroides thetaiotaomicron 3.20.20.80 261 12 82 3.47 4.21
2ebnA00 76.95 Endo-beta-N-acetylglucosaminidase F1Elizabethkingia meningoseptica 3.20.20.80 285 14 79 3.89 4.91
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ta3A00
AGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGY
GTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTA
TVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGV
APVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ta3A00
AGGKTGQVTVFWGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHDLSSVGADIKHCQSKGVPVSLSIGGY
GTGYSLPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVDLFLEHGTPADRYDVLALELAKHNIRGGPGKPLHLTA
TVRCGYPPAAHVGRALATGIFERVHVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGV
APVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:56

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:23

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"