CATH Domain: 1t3iB02 XML data for domain: 1t3iB02

Molscript image for 1t3iB02
1t3iB02
PDB coordinates for domain 1t3iB02

PDB 1t3i, Chain B, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.17
3.40.640.10.17.1
3.40.640.10.17.1.1
3.40.640.10.17.1.1.1
3.40.640.10.17.1.1.1.1

Segment boundaries for domain 1t3iB02

Chopping figure for domain 1t3iB02
DomainStart PDB ResidueStop PDB Residue
1t3iB01 7 34
1t3iB01 302 414
1t3iB02 41 301

Structural Neighbourhood (19 entries)

There are 19 matching structural neighberhood comparisons for CATH ID 3.40.640.10.17.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 19 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p3wA02 88.25 Thiamine metabolismCysteine desulfurase activitySelenocysteine lyase activityCysteine desulfuraseIron-sulfur cluster assembly 3.40.640.10 247 27 93 2.11 2.25
2yrrA02 83.64 Thermus thermophilus HB8Aminotransferase, class V 3.40.640.10 241 17 91 3.73 4.10
1bs0A02 83.20 Biotin metabolismMetabolic pathways8-amino-7-oxononanoate synthase [EC:2.3.1.47]8-amino-7-oxononanoate synthase activityBiotin biosynthetic process 3.40.640.10 228 15 84 4.09 4.86
1m32A02 81.81 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.40.640.10 237 20 89 4.08 4.58
1xi9A02 80.92 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.40.640.10 242 13 84 3.83 4.53
3dydA02 79.47 Tyrosine metabolismL-tyrosine:2-oxoglutarate aminotransferase activityPhenylalanine metabolismMetabolic pathwaysUbiquinone and other terpenoid-quinone biosynthesis 3.40.640.10 244 13 84 3.90 4.64
2oatA02 79.47 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.40.640.10 250 9 83 3.50 4.18
1d2fA02 79.39 Nitrogen metabolismSelenoamino acid metabolismSulfur metabolismMetabolic pathwaysCysteine and methionine metabolism 3.40.640.10 243 12 84 3.40 4.01
1o69A01 78.86 Campylobacter jejuniAminotransferase homolog 3.40.640.10 233 15 86 3.76 4.33
3ffhB02 78.76 Tyrosine metabolismListeria innocuaHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 208 12 75 3.34 4.40
1zodA02 78.63 2,2-dialkylglycine decarboxylaseBurkholderia cepacia 3.40.640.10 264 7 84 3.68 4.38
2gsaA02 78.22 Porphyrin and chlorophyll metabolismGlutamate-1-semialdehyde 2,1-aminomutaseGlutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]Synechococcus elongatus PCC 6301Metabolic pathways 3.40.640.10 249 13 82 3.85 4.64
1c7nA02 78.15 Treponema denticolaHemolysin 3.40.640.10 225 11 77 3.28 4.21
2qmaA03 77.87 Diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]Vibrio parahaemolyticusGlycine, serine and threonine metabolismDiaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylaseMetabolic pathways 3.40.640.10 238 10 81 3.49 4.31
1fg7A01 77.17 Tyrosine metabolismHistidine metabolismMetabolic pathwaysPhenylalanine metabolismNovobiocin biosynthesis 3.40.640.10 203 15 75 3.51 4.67
3ftbA02 76.98 Tyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismPhenylalanine metabolismMetabolic pathways 3.40.640.10 222 14 80 3.12 3.87
1svvA01 76.52 Leishmania major strain FriedlinThreonine aldolase [EC:4.1.2.5]Glycine, serine and threonine metabolismMetabolic pathwaysPutative uncharacterized protein 3.40.640.10 242 11 81 4.02 4.92
1ajsB02 76.44 Tyrosine metabolismArginine and proline metabolismSus scrofaAspartate aminotransferase [EC:2.6.1.1]Aspartate aminotransferase, cytoplasmic 3.40.640.10 278 10 80 3.69 4.56
1uu1A02 75.60 Thermotoga maritimaTyrosine metabolismHistidinol-phosphate aminotransferase [EC:2.6.1.9]Histidine metabolismMetabolic pathways 3.40.640.10 203 13 75 3.64 4.79
Displaying entries 1 to 19 (page 1 of 1)


Domain ATOM Sequence

>pdb|1t3iB02
PRAVLEKLMHYYENDNANVAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIIT
TVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVL
VDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTP
AIAEAIALGAAVDYLTDL    

Domain COMBS Sequence

>pdb|1t3iB02
PRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDE
IITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGA
KVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEA
GTPAIAEAIALGAAVDYLTDL    

Domain History Events (8)

Domain assigned by auto on 02 Sep 2007 22:29

Assigning to "3.40.640.10" based on similarity with "1t3iA02"

Flow stage update by auto on 02 Sep 2007 22:26

No in_process hits for Domain "1t3iB02" ready to be processed

Update comment by auto on 02 Sep 2007 18:13

Domain "1t3iB02" hits Domain "1t3iA02" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Sep 2007 18:07

Domain "1t3iB02" hits Domain "1t3iA02" (100% over 100%) which is currently in process

Flow stage update by auto on 02 Sep 2007 18:07

NW result present for Domain "1t3iB02"

Flow stage update by auto on 01 Sep 2007 14:05

All required files are present for Domain "1t3iB02"

Flow stage update by auto on 31 Aug 2007 19:48

Beginning processing for Domain "1t3iB02"

Insertion by auto on 31 Aug 2007 18:07

Final ChopClose added based on similarity with "1t3iA"