CATH Domain: 1t2dA02 XML data for domain: 1t2dA02

Molscript image for 1t2dA02
1t2dA02
PDB coordinates for domain 1t2dA02

PDB 1t2d, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.110 L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
3.90.110.10 L-2-Hydroxyisocaproate Dehydrogenase, subunit A, domain 2 Gene3D
3.90.110.10.1
3.90.110.10.1.1
3.90.110.10.1.1.1
3.90.110.10.1.1.1.1
3.90.110.10.1.1.1.1.1

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Segment boundaries for domain 1t2dA02

Chopping figure for domain 1t2dA02
DomainStart PDB ResidueStop PDB Residue
1t2dA01 1 148
1t2dA02 149 315

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.90.110.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3h3jA02 90.57 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.90.110.10 167 29 98 1.88 1.91
6ldhA02 89.22 Squalus acanthiasL-lactate dehydrogenase A chain 3.90.110.10 167 20 98 2.60 2.65
1hyeA02 88.55 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Methanocaldococcus jannaschiiPyruvate metabolismMetabolic pathways 3.90.110.10 157 28 93 2.38 2.55
1o6zA01 88.08 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismHaloarcula marismortuiGlyoxylate and dicarboxylate metabolism 3.90.110.10 161 29 95 2.15 2.24
2x0jA02 88.00 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Archaeoglobus fulgidusPyruvate metabolismMetabolic pathways 3.90.110.10 152 26 89 1.67 1.86
1hyhC02 87.60 Weissella confusaL-2-hydroxyisocaproate dehydrogenase 3.90.110.10 157 20 92 1.91 2.06
1y7tA02 85.29 Citrate cycle (TCA cycle)Pyruvate metabolismMetabolic pathwaysGlyoxylate and dicarboxylate metabolismMalate dehydrogenase [EC:1.1.1.37] 3.90.110.10 172 16 90 2.32 2.56
3hhpA02 83.23 Citrate cycle (TCA cycle)Pyruvate metabolismGlyoxylate and dicarboxylate metabolismMetabolic pathwaysMalate dehydrogenase [EC:1.1.1.37] 3.90.110.10 156 17 86 2.72 3.15
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1t2dA02
LGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIV
NLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAET
KRMKALA
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1t2dA02
LGGVLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIV
NLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAET
KRMKALAHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:33

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"