CATH Domain: 1t15A01 XML data for domain: 1t15A01

Molscript image for 1t15A01
1t15A01
PDB coordinates for domain 1t15A01

PDB 1t15, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.10190 Gene3D
3.40.50.10190.3
3.40.50.10190.3.1
3.40.50.10190.3.1.1
3.40.50.10190.3.1.1.1
3.40.50.10190.3.1.1.1.1

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Segment boundaries for domain 1t15A01

Chopping figure for domain 1t15A01
DomainStart PDB ResidueStop PDB Residue
1t15A01 1649 1755
1t15A02 1756 1859

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.50.10190.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nteA01 90.25 BRCA1-associated RING domain protein 1Protein homodimerization activityRNA bindingBRCA1-A complexTissue homeostasis 3.40.50.10190 100 25 88 1.32 1.49
1cdzA00 84.30 DNA repair protein XRCC1Homo sapiensProtein binding 3.40.50.10190 96 10 80 2.23 2.77
1gzhB01 84.27 CytoplasmHomo sapiensTumor suppressor p53-binding protein 1Protein binding 3.40.50.10190 103 15 79 3.42 4.31
1imoA00 74.36 DNA ligase 3Reciprocal meiotic recombinationDNA bindingHomo sapiensProtein binding 3.40.50.10190 88 12 64 2.93 4.54
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1t15A01
RMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKM
LNEHDFEVRGDVVNGRNHQGPKRARES
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1t15A01
VNKRMSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKE
RKMLNEHDFEVRGDVVNGRNHQGPKRARES
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:23

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:45

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"