CATH Domain: 1sznA02 XML data for domain: 1sznA02

Molscript image for 1sznA02
1sznA02
PDB coordinates for domain 1sznA02

PDB 1szn, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.1180 Golgi alpha-mannosidase II Gene3D
2.60.40.1180.4
2.60.40.1180.4.1
2.60.40.1180.4.1.1
2.60.40.1180.4.1.1.1
2.60.40.1180.4.1.1.1.1

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Segment boundaries for domain 1sznA02

Chopping figure for domain 1sznA02
DomainStart PDB ResidueStop PDB Residue
1sznA01 1 315
1sznA02 316 417

Structural Neighbourhood (10 entries)

There are 10 matching structural neighberhood comparisons for CATH ID 2.60.40.1180.4.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 10 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1uasA02 87.50 Alpha-galactosidaseOryza sativa Japonica Group 2.60.40.1180 88 25 85 2.22 2.60
3hg3B02 85.94 Galactose metabolismAlpha-galactosidase AExtracellular regionGlycosphingolipid catabolic processGlycosphingolipid biosynthesis - globo series 2.60.40.1180 101 15 89 3.35 3.75
3cc1A02 85.19 BH1870 proteinBacillus halodurans 2.60.40.1180 84 14 78 2.45 3.12
1ktbA02 84.47 Alpha-N-acetylgalactosaminidaseGallus gallus 2.60.40.1180 91 13 84 2.73 3.24
1j0hA04 80.85 NeopullulanaseGeobacillus stearothermophilus 2.60.40.1180 83 4 80 2.49 3.10
1ji1A03 80.37 Neopullulanase 1Thermoactinomyces vulgaris 2.60.40.1180 90 10 83 3.02 3.62
1wzlA04 79.11 Neopullulanase 2Thermoactinomyces vulgaris 2.60.40.1180 83 8 80 3.37 4.19
1ea9C04 78.02 Bacillus sp.Cyclomaltodextrinase 2.60.40.1180 81 4 76 2.98 3.90
3edfA03 76.56 CyclomaltodextrinaseFlavobacterium sp. 92 2.60.40.1180 80 12 77 3.47 4.48
1iv8A05 73.58 Sulfolobus acidocaldariusGlycosyltrehalose-producing enzyme 2.60.40.1180 66 6 64 2.95 4.56
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Displaying entries 1 to 10 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1sznA02
YGQPATPYKWGINPDWTFNVTYPAEFWAGPSSKGHLVLMVNTLDITATKEAKWNEIPGLSAGHYEVRDVWSDKDLGCLSS
YKAAVAAHDTAVILVGKKCQRW
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1sznA02
YGQPATPYKWGINPDWTFNVTYPAEFWAGPSSKGHLVLMVNTLDITATKEAKWNEIPGLSAGHYEVRDVWSDKDLGCLSS
YKAAVAAHDTAVILVGKKCQRW
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:50

Cut based on decision in database "DomChop" on "cathdb"