CATH Domain: 1svcP01 XML data for domain: 1svcP01

Molscript image for 1svcP01
1svcP01
PDB coordinates for domain 1svcP01

PDB 1svc, Chain P, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.340 Gene3D
2.60.40.340.1
2.60.40.340.1.4
2.60.40.340.1.4.1
2.60.40.340.1.4.1.2
2.60.40.340.1.4.1.2.1

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Segment boundaries for domain 1svcP01

Chopping figure for domain 1svcP01
DomainStart PDB ResidueStop PDB Residue
1svcP01 43 244
1svcP02 249 353

Structural Neighbourhood (2 entries)

There are 2 matching structural neighberhood comparisons for CATH ID 2.60.40.340.1.4.1.2.1 (SIMAX score < 5)

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Displaying entries 1 to 2 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1p7hL01 82.94 Nuclear factor of activated T-cells, cytoplasmic 2Sequence-specific DNA binding transcription factor activityTranscription activator activityNucleusHomo sapiens 2.60.40.340 173 16 79 2.28 2.87
3iagC01 73.28 Transcription factor bindingHeart developmentRegulation of timing of cell differentiationDefense response to bacteriumChromatin binding 2.60.40.1450 166 7 55 2.57 4.65
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Displaying entries 1 to 2 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1svcP01
PYLQILEQPKQRGFRFRYVAEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDG
ICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAAL
QQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1svcP01
PYLQILEQPKQRGFRFRYVAEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDG
ICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAAL
QQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSK
BLAST against CATH

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Domain History Events (6)

Domain assigned by auto on 15 Dec 2006 07:35

Assigning to "2.60.40.340" based on similarity with "1bvoA00"

Flow stage update by auto on 15 Dec 2006 07:33

No in_process hits for Domain "1svcP01" ready to be processed

Flow stage update by auto on 15 Dec 2006 07:33

NW result present for Domain "1svcP01"

Flow stage update by auto on 14 Dec 2006 15:49

All required files are present for Domain "1svcP01"

Flow stage update by auto on 13 Dec 2006 19:36

Beginning processing for Domain "1svcP01"

Insertion by cuff on 13 Dec 2006 16:18

nice batch of choppings