CATH Domain: 1sqsA00 XML data for domain: 1sqsA00

Molscript image for 1sqsA00
1sqsA00
PDB coordinates for domain 1sqsA00

PDB 1sqs, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.10
3.40.50.360.10.1
3.40.50.360.10.1.1
3.40.50.360.10.1.1.1
3.40.50.360.10.1.1.1.1

Segment boundaries for domain 1sqsA00

Chopping figure for domain 1sqsA00
DomainStart PDB ResidueStop PDB Residue
1sqsA00 2 232

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.40.50.360.10.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3gfsC00 80.59 Bacillus subtilisFMN-dependent NADPH-azoreductase 3.40.50.360 169 14 68 2.52 3.66
2hpvA00 80.02 FMN-dependent NADH-azoreductaseFMN-dependent NADH-azoreductase [EC:1.7.-.-]Enterococcus faecalis 3.40.50.360 204 11 73 3.36 4.59
1ydgA00 78.48 Trp repressor binding protein WrbA, putativeTrp repressor binding proteinDeinococcus radiodurans 3.40.50.360 201 9 66 3.30 4.95
1e5dA01 78.36 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 15 61 2.20 3.58
2ohhA02 78.15 Type A flavoprotein fprAMethanothermobacter marburgensis str. Marburg 3.40.50.360 144 12 61 2.43 3.96
3d7nA00 77.95 Agrobacterium tumefaciens str. C58Flavodoxin, WrbA-like protein 3.40.50.360 153 13 64 3.05 4.76
1bvyF00 76.42 Bacillus megateriumBifunctional P-450/NADPH-P450 reductase 3.40.50.360 152 11 62 3.02 4.82
1vmeA02 76.18 Thermotoga maritimaPutative uncharacterized protein 3.40.50.360 144 13 60 2.98 4.89
5nulA00 75.34 Clostridium beijerinckiiFlavodoxin 3.40.50.360 138 16 58 2.54 4.32
Displaying entries 1 to 9 (page 1 of 1)


Domain ATOM Sequence

>pdb|1sqsA00
NKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESD
IIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYGGQILHQVSITNSLKDIA
EAQLEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKYWEKKRLFEANSLEEWYYVEN    

Domain COMBS Sequence

>pdb|1sqsA00
XNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLES
DIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESNGSDNVSEYLRDIFSYXGGQILHQVSITNSLKD
IAEAQLXEATYKIEDVLEGKIKYKTTDYQERAYQTLKLILENYDSEHFEKXYWEKKRLFEANSLEEWYYVENIKLEHHHH
HH    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:49

Cut based on decision in database "DomChop" on "cathdb"