CATH Domain: 1smlA00 XML data for domain: 1smlA00

Molscript image for 1smlA00
1smlA00
PDB coordinates for domain 1smlA00

PDB 1sml, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.15 Metallo-beta-lactamase; Chain A
3.60.15.10 Metallo-beta-lactamase, chain A Gene3D
3.60.15.10.10
3.60.15.10.10.1
3.60.15.10.10.1.1
3.60.15.10.10.1.1.1
3.60.15.10.10.1.1.1.1

[top]
Segment boundaries for domain 1smlA00

Chopping figure for domain 1smlA00
DomainStart PDB ResidueStop PDB Residue
1smlA00 2 267

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 3.60.15.10.10.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1e5dA02 79.70 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.60.15.10 247 12 73 3.22 4.39
1jjeB00 78.10 Pseudomonas aeruginosaBeta-lactamase 3.60.15.10 221 13 76 3.23 4.21
2p97A00 75.84 Anabaena variabilis ATCC 29413Putative uncharacterized protein 3.60.15.10 197 14 66 2.89 4.32
[1]
Displaying entries 1 to 3 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1smlA00
EVPLPQLRAYTVDASWLQPMAPLQIADHTWQIGTEDLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLIL
LSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGHT
PGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASNWDYAAGARAGA
KALTCKAYADAAEQKFDGQLAKETAG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1smlA00
AEVPLPQLRAYTVDASWLQPMAPLQIADHTWQIGTEDLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLI
LLSHAHADHAGPVAELKRRTGAKVAANAESAVLLARGGSDDLHFGDGITYPPANADRIVMDGEVITVGGIVFTAHFMAGH
TPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFATVRALPCDVLLTPHPGASNWDYAAGARAG
AKALTCKAYADAAEQKFDGQLAKETAGAR
BLAST against CATH

[top]
Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:31

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:31

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:53

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"