CATH Domain: 1sjnC00 XML data for domain: 1sjnC00

Molscript image for 1sjnC00
1sjnC00
PDB coordinates for domain 1sjnC00

PDB 1sjn, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.70 Distorted Sandwich
2.70.40 Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A
2.70.40.10 Gene3D
2.70.40.10.4
2.70.40.10.4.1
2.70.40.10.4.1.1
2.70.40.10.4.1.1.1
2.70.40.10.4.1.1.1.2

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Segment boundaries for domain 1sjnC00

Chopping figure for domain 1sjnC00
DomainStart PDB ResidueStop PDB Residue
1sjnC00 2 145

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.70.40.10.4.1.1.1.2 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1f7dA00 87.87 Pol polyproteinFeline immunodeficiency virus (isolate Petaluma) 2.70.40.10 118 32 84 1.63 1.93
2okbA00 86.72 Vaccinia virusDUTP pyrophosphatase 2.70.40.10 113 41 80 1.35 1.67
2r9qC01 79.53 2.70.40.10 163 17 69 3.27 4.72
2r9qA02 78.98 2.70.40.10 163 12 65 2.73 4.20
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1sjnC00
STTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGT
IDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1sjnC00
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPG
TIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"