CATH Domain: 1sixA00 XML data for domain: 1sixA00

Molscript image for 1sixA00
1sixA00
PDB coordinates for domain 1sixA00

PDB 1six, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.70 Distorted Sandwich
2.70.40 Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A
2.70.40.10 Gene3D
2.70.40.10.2
2.70.40.10.2.1
2.70.40.10.2.1.1
2.70.40.10.2.1.1.1
2.70.40.10.2.1.1.1.1

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Segment boundaries for domain 1sixA00

Chopping figure for domain 1sixA00
DomainStart PDB ResidueStop PDB Residue
1sixA00 -8 144

Structural Neighbourhood (5 entries)

There are 5 matching structural neighberhood comparisons for CATH ID 2.70.40.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 5 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1sjnB00 95.48 Pyrimidine metabolismMetabolic pathwaysDeoxyuridine 5'-triphosphate nucleotidohydrolaseDUTP pyrophosphatase [EC:3.6.1.23]Mycobacterium tuberculosis 2.70.40.10 140 100 91 0.68 0.74
3ehwA00 89.09 DUTP diphosphatase activityDNA replicationNucleusHomo sapiensDeoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial 2.70.40.10 141 38 87 1.19 1.36
1f7dA00 86.17 Pol polyproteinFeline immunodeficiency virus (isolate Petaluma) 2.70.40.10 118 32 77 1.71 2.22
2okbA00 85.20 Vaccinia virusDUTP pyrophosphatase 2.70.40.10 113 41 73 1.35 1.83
2r9qC01 79.51 2.70.40.10 163 15 69 3.27 4.68
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Displaying entries 1 to 5 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1sixA00
SGLVPRGSHMSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRV
GLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1sixA00
MGSSHHHHHHSSGLVPRGSHMSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGL
VHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSR
GDGGHGSSGGHASL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:47

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:08

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"