CATH Domain: 1sh8B00 XML data for domain: 1sh8B00

Molscript image for 1sh8B00
1sh8B00
PDB coordinates for domain 1sh8B00

PDB 1sh8, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.9
3.10.129.10.9.1
3.10.129.10.9.1.1
3.10.129.10.9.1.1.1
3.10.129.10.9.1.1.1.1

Segment boundaries for domain 1sh8B00

Chopping figure for domain 1sh8B00
DomainStart PDB ResidueStop PDB Residue
1sh8B00 -1 147

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 3.10.129.10.9.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1yocA00 87.78 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 145 19 91 2.15 2.36
1wluA00 84.61 Thermus thermophilus HB8Phenylacetic acid degradation protein PaaIPhenylacetic acid degradation protein 3.10.129.10 117 16 76 2.53 3.31
2fs2B00 84.52 Acyl-coenzyme A thioesterase paaIPhenylacetic acid degradation proteinEscherichia coli K-12 3.10.129.10 134 14 84 2.90 3.43
1zkiA00 84.49 Pseudomonas aeruginosaPhenylacetic acid degradation proteinPutative uncharacterized protein 3.10.129.10 118 23 78 2.35 2.99
2qwzA01 83.71 Phenylacetic acid degradation-related proteinRuegeria sp. TM1040 3.10.129.10 128 21 83 2.81 3.35
2pimA00 83.24 Ralstonia eutropha JMP134Phenylacetic acid degradation-related protein 3.10.129.10 127 18 81 3.03 3.70
2ov9A01 81.91 Rhodococcus jostii RHA1Putative uncharacterized protein 3.10.129.10 142 9 85 4.00 4.66
1ixlA00 81.87 Putative uncharacterized protein PH1136Pyrococcus horikoshii 3.10.129.10 127 14 80 3.49 4.33
1njkA00 79.88 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 13 68 3.15 4.60
1z6bC00 79.06 Fatty acid biosynthesisMetabolic pathways3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]Plasmodium falciparumBeta-hydroxyacyl-ACP dehydratase 3.10.129.10 138 11 81 3.58 4.41
1tbuB00 78.53 Palmitoyl-CoA hydrolase [EC:3.1.2.2]Protein bindingBiosynthesis of unsaturated fatty acidsPeroxisomal acyl-coenzyme A thioester hydrolase 1Peroxisome 3.10.129.10 98 9 64 3.16 4.90
3b7kC02 77.56 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 12 65 2.56 3.89
Displaying entries 1 to 12 (page 1 of 1)


Domain ATOM Sequence

>pdb|1sh8B00
GHMPLPTELARHLTEEKIAFVQRSGLRAEVLEPGYVRLRMPGAGNENHIGSMYAGALFTLAELPGGALFLTSFDSARFYP
IVKEMTLRFRRPAKGDIRVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSH    

Domain COMBS Sequence

>pdb|1sh8B00
GHMPLPTELARHLTEEKIAFVQRSGLRAEVLEPGYVRLRMPGAGNENHIGSMYAGALFTLAELPGGALFLTSFDSARFYP
IVKEMTLRFRRPAKGDIRVEARLDAERIRQLETEAGERGKAEYSLELQLTDEQGEVVAESAALYQLRSHARPGS    

Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:55

Assigning to "3.10.129.10" based on similarity with "1sh8A00" (NWSI: 100, NWO: 100, SPS: 94.30, SPO: 96, RMSD: 1.42)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1sh8B00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1sh8B00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1sh8B00"

Insertion by auto on 09 Mar 2006 03:55

Final ChopClose added based on similarity with "1sh8A" [LEE: 1, LME: 0, MR: 5, LG: 5, SS: 94.30, SI: 100, SO: 100]