CATH Domain: 1senA00 XML data for domain: 1senA00

Molscript image for 1senA00
1senA00
PDB coordinates for domain 1senA00

PDB 1sen, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.30 Glutaredoxin
3.40.30.10 Glutaredoxin Gene3D
3.40.30.10.13
3.40.30.10.13.1
3.40.30.10.13.1.1
3.40.30.10.13.1.1.1
3.40.30.10.13.1.1.1.1

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Segment boundaries for domain 1senA00

Chopping figure for domain 1senA00
DomainStart PDB ResidueStop PDB Residue
1senA00 30 164

Structural Neighbourhood (16 entries)

There are 16 matching structural neighberhood comparisons for CATH ID 3.40.30.10.13.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 16 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3f9uA00 80.92 Bacteroides fragilis NCTC 9343Putative exported cytochrome C biogenesis-related protein 3.40.30.10 139 10 82 2.84 3.46
2vimA00 80.63 Fasciola hepaticaThioredoxin (TRX) 3.40.30.10 104 18 71 2.42 3.38
2pu9C00 80.62 Thioredoxin F-type, chloroplasticSpinacia oleraceaProtein binding 3.40.30.10 111 15 79 3.95 4.99
1gh2A00 80.00 CytoplasmHomo sapiensThioredoxin-like protein 1Disulfide oxidoreductase activity 3.40.30.10 107 14 74 2.47 3.31
1w4vA00 79.76 Thioredoxin, mitochondrialHomo sapiensThioredoxin 1 3.40.30.10 110 18 76 3.02 3.97
3gnjA00 79.51 Desulfitobacterium hafniense DCB-2Thioredoxin domain protein 3.40.30.10 107 15 77 3.41 4.39
2e0qA00 79.35 Sulfolobus tokodaii140aa long hypothetical thioredoxinThioredoxin 1 3.40.30.10 104 16 73 2.94 3.98
1thxA00 79.18 Nostoc sp. PCC 7120Thioredoxin-2 3.40.30.10 108 15 78 3.01 3.84
2b5eA01 79.16 Protein disulfide isomerase activityProtein disulfide oxidoreductase activityProtein bindingProtein foldingEndoplasmic reticulum lumen 3.40.30.10 119 12 82 3.61 4.40
1qgvA00 78.91 SpliceosomeSpliceosomal complexU5 snRNP protein, DIM1 familyHomo sapiensProtein binding 3.40.30.10 130 6 85 2.99 3.51
3gixA00 78.64 Thioredoxin-like protein 4BHomo sapiens 3.40.30.10 133 12 83 3.38 4.04
1v98A00 78.13 Thermus thermophilus HB8Thioredoxin 2 [EC:1.8.1.8]Thioredoxin 3.40.30.10 92 14 68 3.05 4.44
2in3A01 77.80 Nitrosomonas europaeaPutative protein-disulfide isomerasePutative uncharacterized protein 3.40.30.10 78 14 58 2.76 4.74
1wouA00 77.36 Thioredoxin domain-containing protein 17Tumor necrosis factor-mediated signaling pathwayProtein bindingCytosolProtein-disulfide reductase activity 3.40.30.10 119 12 70 3.10 4.37
1sjiA03 76.65 Canis lupus familiarisCalsequestrin-2 3.40.30.10 123 6 84 3.44 4.08
1a8yA02 75.25 Calsequestrin-1Oryctolagus cuniculus 3.40.30.10 102 12 71 3.11 4.34
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Displaying entries 1 to 16 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1senA00
LGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDG
GYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFR
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1senA00
LGKGFGDHIHWRTLEDGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDG
GYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQERLTGDAFRKKHLEDEL
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:46

Cut based on decision in database "DomChop" on "cathdb"