CATH Domain: 1sddB01 XML data for domain: 1sddB01

Molscript image for 1sddB01
1sddB01
PDB coordinates for domain 1sddB01

PDB 1sdd, Chain B, Domain 1

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.40 Immunoglobulin-like
2.60.40.420 Cupredoxins - blue copper proteins Gene3D
2.60.40.420.36
2.60.40.420.36.1
2.60.40.420.36.1.1
2.60.40.420.36.1.1.1
2.60.40.420.36.1.1.1.1

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Segment boundaries for domain 1sddB01

Chopping figure for domain 1sddB01
DomainStart PDB ResidueStop PDB Residue
1sddB01 1538 1722
1sddB02 1723 1862
1sddB03 1863 2023
1sddB04 2024 2182

Structural Neighbourhood (0 entries)

Sorry, we could not find any non-redundant representatives with similar structural scores to this domain in CATH.


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Domain ATOM Sequence 

>pdb|1sddB01
NTGNRKYYYIAAEEISWDYSKFVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVRFKNLASR
PYSLHAHGLSNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMP
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1sddB01
SNTGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQ
VRFKNLASRPYSLHAHGLSYEKSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE
KDIHSGLIGPLLICRKGTLDKETNMP
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:54

Assigning to "2.60.40.420" based on similarity with "1sddA01" (NWSI: 41.4364640883978, NWO: 95.1612903225806, SPS: 87.39, SPO: 85, RMSD: 1.51)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1sddB01"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1sddB01"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1sddB01"

Insertion by auto on 05 Mar 2006 23:46

Cut based on decision in database "DomChop" on "cathdb"