CATH Domain: 1sacA00 XML data for domain: 1sacA00

Molscript image for 1sacA00
1sacA00
PDB coordinates for domain 1sacA00

PDB 1sac, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.60 Sandwich
2.60.120 Jelly Rolls
2.60.120.200 Gene3D
2.60.120.200.14
2.60.120.200.14.1
2.60.120.200.14.1.1
2.60.120.200.14.1.1.1
2.60.120.200.14.1.1.1.6

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Segment boundaries for domain 1sacA00

Chopping figure for domain 1sacA00
DomainStart PDB ResidueStop PDB Residue
1sacA00 1 204

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 2.60.120.200.14.1.1.1.6 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3bopC00 79.61 Mus musculusPutative uncharacterized protein 2.60.120.200 169 13 75 3.17 4.20
2jd4A02 79.16 Epithelial tube branching involved in lung morphogenesisEstablishment of epithelial cell apical/basal polarityLaminin subunit alpha-1Morphogenesis of an epithelial sheetExtracellular matrix structural constituent 2.60.120.200 176 9 81 3.30 4.03
1a8dA01 74.88 Tetanus toxinTentoxilysin [EC:3.4.24.68]Clostridium tetani 2.60.120.200 246 12 67 3.06 4.51
1jhnA01 71.94 CalnexinCanis lupus familiarisCalnexinAntigen processing and presentation 2.60.120.200 232 2 67 3.30 4.91
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1sacA00
HTDLSGKVFVFPRESVTDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYIGRHKV
TSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMW
DSVLPPENILSAYQGTPLPANILDWQALNYEIRGYVIIKPLVWV
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1sacA00
HTDLSGKVFVFPRESVTDHVNLITPLEKPLQNFTLCFRAYSDLSRAYSLFSYNTQGRDNELLVYKERVGEYSLYIGRHKV
TSKVIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQGYFVEAQPKIVLGQEQDSYGGKFDRSQSFVGEIGDLYMW
DSVLPPENILSAYQGTPLPANILDWQALNYEIRGYVIIKPLVWV
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:46

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:06

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"