CATH Domain: 1s5uE00 XML data for domain: 1s5uE00

Molscript image for 1s5uE00
1s5uE00
PDB coordinates for domain 1s5uE00

PDB 1s5u, Chain E, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.10 Roll
3.10.129 Thiol Ester Dehydrase; Chain A
3.10.129.10 Gene3D
3.10.129.10.10
3.10.129.10.10.1
3.10.129.10.10.1.1
3.10.129.10.10.1.1.1
3.10.129.10.10.1.1.1.1

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Segment boundaries for domain 1s5uE00

Chopping figure for domain 1s5uE00
DomainStart PDB ResidueStop PDB Residue
1s5uE00 -1 134

Structural Neighbourhood (11 entries)

There are 11 matching structural neighberhood comparisons for CATH ID 3.10.129.10.10.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 11 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2oafA00 89.34 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 135 16 94 1.94 2.06
1njkA00 89.13 Long-chain acyl-CoA thioesterase tesCAcyl-CoA thioesterase activityThioesterase III [EC:3.1.2.-]Fatty acid beta-oxidationEscherichia coli K-12 3.10.129.10 130 26 93 2.26 2.42
2o5uC00 88.73 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 140 17 95 2.21 2.33
2aliA00 88.67 Pseudomonas aeruginosaPutative uncharacterized protein 3.10.129.10 126 19 91 2.15 2.36
2oiwA00 88.41 Geobacillus kaustophilusHypothetical conserved protein 3.10.129.10 129 15 91 2.46 2.70
2hljA01 87.36 Pseudomonas putida KT2440Putative uncharacterized protein 3.10.129.10 132 12 92 2.59 2.80
2nujA01 87.28 Jannaschia sp. CCS1Thioesterase superfamily 3.10.129.10 145 19 90 2.24 2.48
2essA01 87.21 Bacteroides thetaiotaomicronAcyl-ACP thioesterase 3.10.129.10 138 9 94 2.82 2.99
3bjkD00 85.34 Acyl-CoA thioesterase YciA [EC:3.1.2.-]Haemophilus influenzaeBiosynthesis of unsaturated fatty acidsUncharacterized acyl-CoA thioester hydrolase HI_0827 3.10.129.10 139 11 87 2.62 3.01
3b7kB01 82.90 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 140 10 78 2.71 3.45
3b7kC02 78.75 Acetyl-CoA hydrolase [EC:3.1.2.1]Pyruvate metabolismHomo sapiensAcyl-coenzyme A thioesterase 12 3.10.129.10 110 10 76 3.51 4.59
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Displaying entries 1 to 11 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1s5uE00
GHMNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEI
QTEITSMRGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1s5uE00
GHMNTTLFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHFSQQALMAERVAFVVRKMTVEYYAPARLDDMLEI
QTEITSMRGTSLVFTQRIVNAENTLLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQGS
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:51

Assigning to "3.10.129.10" based on similarity with "1s5uA00" (NWSI: 100, NWO: 100, SPS: 94.51, SPO: 94, RMSD: 1.26)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1s5uE00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1s5uE00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1s5uE00"

Insertion by auto on 09 Mar 2006 03:07

Final ChopClose added based on similarity with "1s5uA" [LEE: 5, LME: 0, MR: 0, LG: 5, SS: 94.51, SI: 100, SO: 100]