CATH Domain: 1s2oA01 XML data for domain: 1s2oA01

Molscript image for 1s2oA01
1s2oA01
PDB coordinates for domain 1s2oA01

PDB 1s2o, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.1000 Gene3D
3.40.50.1000.8
3.40.50.1000.8.1
3.40.50.1000.8.1.1
3.40.50.1000.8.1.1.1
3.40.50.1000.8.1.1.1.1

Segment boundaries for domain 1s2oA01

Chopping figure for domain 1s2oA01
DomainStart PDB ResidueStop PDB Residue
1s2oA01 1 88
1s2oA01 160 244
1s2oA02 89 159

Structural Neighbourhood (33 entries)

There are 33 matching structural neighberhood comparisons for CATH ID 3.40.50.1000.8.1.1.1.1 (SIMAX score < 5)

Displaying entries 1 to 33 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3gygC01 86.04 Bacillus subtilisNTD biosynthesis operon putative hydrolase ntdB 3.40.50.1000 191 20 83 1.75 2.10
1nf2A01 85.09 Thermotoga maritimaPutative uncharacterized protein 3.40.50.1000 161 19 90 3.08 3.39
1rlmA01 83.97 Sugar phosphatase supHSugar-phosphatase [EC:3.1.3.23]Escherichia coli K-12 3.40.50.1000 162 16 88 3.10 3.51
1k1eD00 81.66 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]Haemophilus influenzaeLipopolysaccharide biosynthesisMetabolic pathways 3.40.50.1000 170 12 80 3.35 4.14
1u02A01 81.13 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.40.50.1000 149 16 79 3.89 4.88
2nyvA01 80.05 Phosphoglycolate phosphatase [EC:3.1.3.18]Glyoxylate and dicarboxylate metabolismMetabolic pathwaysAquifex aeolicusPhosphoglycolate phosphatase 3.40.50.1000 151 13 83 3.34 3.98
1wpgA04 79.55 Calcium ion bindingATP catabolic processER-Golgi intermediate compartmentCalcium-transporting ATPase activitySarcoplasmic/endoplasmic reticulum calcium ATPase 1 3.40.50.1000 156 12 72 2.54 3.49
2hcfA01 79.38 Chlorobaculum tepidumHydrolase, haloacid dehalogenase-like family 3.40.50.1000 156 17 82 2.97 3.62
2hszA01 79.37 Phosphoglycolate phosphatase [EC:3.1.3.18]Haemophilus somnus 129PTMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase 3.40.50.1000 148 18 80 3.10 3.86
1swvA01 79.09 Bacillus cereusPhosphonoacetaldehyde hydrolase 3.40.50.1000 178 10 80 3.32 4.13
2hdoA01 79.06 Phosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus plantarumMetabolic pathwaysGlyoxylate and dicarboxylate metabolismPhosphoglycolate phosphatase (Putative) 3.40.50.1000 134 14 74 2.93 3.93
3e58B01 79.02 Streptococcus thermophilus LMG 18311Beta-phosphoglucomutase, putative 3.40.50.1000 136 11 73 3.06 4.17
2ah5A01 78.76 Glyoxylate and dicarboxylate metabolismMetabolic pathwaysPhosphoglycolate phosphatase [EC:3.1.3.18]Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 142 18 80 3.88 4.79
3d6jA01 78.72 Phosphoglycolate phosphatase [EC:3.1.3.18]Putative haloacid dehalogenase-like hydrolaseBacteroides fragilis NCTC 9343Glyoxylate and dicarboxylate metabolismMetabolic pathways 3.40.50.1000 137 11 75 3.11 4.11
2fi1A01 78.65 Hydrolase, haloacid dehalogenase-like familyStreptococcus pneumoniae 3.40.50.1000 123 14 68 3.01 4.38
2fdrA01 78.46 Agrobacterium tumefaciens str. C58Putative uncharacterized protein 3.40.50.1000 150 15 79 3.38 4.24
1te2A01 78.40 Fructose and mannose metabolismMetabolic pathwaysRiboflavin metabolismThiamine metabolismMetal ion binding 3.40.50.1000 141 12 80 3.65 4.54
1u7pD00 78.27 Mus musculusMagnesium-dependent phosphatase 1 3.40.50.1000 161 11 72 3.47 4.76
2pkeA01 78.24 Xanthomonas campestris pv. campestrisPutative hydrolase of the HAD superfamilyHydrolase, haloacid delahogenase-like family 3.40.50.1000 152 11 76 3.11 4.08
2hi0A01 78.03 Putative phosphoglycolate phosphatasePhosphoglycolate phosphatase [EC:3.1.3.18]Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842Metabolic pathwaysGlyoxylate and dicarboxylate metabolism 3.40.50.1000 146 17 81 3.49 4.28
3ed5A01 77.55 Putative HAD-hydrolase yfnBBacillus subtilis2-haloacid dehalogenase [EC:3.8.1.2]1,2-Dichloroethane degradationGamma-Hexachlorocyclohexane degradation 3.40.50.1000 140 14 77 3.19 4.12
1zjjB01 77.48 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.1000 146 13 78 3.61 4.59
1xviB01 77.42 Fructose and mannose metabolismMannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]Putative mannosyl-3-phosphoglycerate phosphataseProtein bindingEscherichia coli K-12 3.40.50.1000 135 22 68 3.25 4.72
2ho4B01 76.08 Mus musculusHaloacid dehalogenase-like hydrolase domain-containing protein 2 3.40.50.1000 159 14 83 3.58 4.27
3i28A01 75.95 PeroxisomeSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase activityEpoxide hydrolase 2 3.40.50.1000 135 14 68 3.25 4.76
2p11A01 75.50 Burkholderia xenovorans LB400Putative uncharacterized protein 3.40.50.1000 140 12 75 3.24 4.31
2pr7A00 75.47 Corynebacterium glutamicumHaloacid dehalogenase/epoxide hydrolase family 3.40.50.1000 131 14 71 3.55 4.95
1cqzA01 75.43 PeroxisomeMus musculusSoluble epoxide hydrolase [EC:3.3.2.10]Arachidonic acid metabolismEpoxide hydrolase 2 3.40.50.1000 162 10 70 3.26 4.62
2oycA01 75.37 Vitamin B6 metabolismPyridoxal phosphate phosphataseHomo sapiensPyridoxal phosphatase [EC:3.1.3.74]Metabolic pathways 3.40.50.1000 167 11 78 3.80 4.87
3b8cA03 75.25 Oxidative phosphorylationArabidopsis thalianaPlasma membraneATPase 2, plasma membrane-typeProtein binding 3.40.50.1000 163 12 75 2.81 3.74
1rkuA01 74.38 Glycine, serine and threonine metabolismMetabolic pathwaysPhosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]Pseudomonas aeruginosaHomoserine kinase 3.40.50.1000 111 12 62 2.48 3.97
2i6xA01 74.10 Hydrolase, haloacid dehalogenase-like familyPutative hydrolase of the HAD superfamilyPorphyromonas gingivalis 3.40.50.1000 127 11 68 3.17 4.61
3bwvA01 73.79 Putative 5'(3')-deoxyribonucleotidaseStaphylococcus epidermidis ATCC 12228 3.40.50.1000 121 10 65 3.26 4.95
Displaying entries 1 to 33 (page 1 of 1)


Domain ATOM Sequence

>pdb|1s2oA01
MRQLLLISDLDNTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQH
WADYLSEHRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAG
AILEAIAHFDFLS    

Domain COMBS Sequence

>pdb|1s2oA01
MRQLLLISDLDNTWVGDQQALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQH
WADYLSEHRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAG
AILEAIAHFDFLS    

Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:43

Cut based on decision in database "DomChop" on "cathdb"