CATH Domain: 1s0aA02 XML data for domain: 1s0aA02

Molscript image for 1s0aA02
1s0aA02
PDB coordinates for domain 1s0aA02

PDB 1s0a, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.640 Aspartate Aminotransferase; domain 2
3.40.640.10 Type I PLP-dependent aspartate aminotransferase-like (Major domain) Gene3D
3.40.640.10.18
3.40.640.10.18.1
3.40.640.10.18.1.1
3.40.640.10.18.1.1.1
3.40.640.10.18.1.1.1.1

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Segment boundaries for domain 1s0aA02

Chopping figure for domain 1s0aA02
DomainStart PDB ResidueStop PDB Residue
1s0aA01 1 60
1s0aA01 331 428
1s0aA02 61 330

Structural Neighbourhood (12 entries)

There are 12 matching structural neighberhood comparisons for CATH ID 3.40.640.10.18.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 12 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1zodA02 88.84 2,2-dialkylglycine decarboxylaseBurkholderia cepacia 3.40.640.10 264 23 95 2.26 2.38
1sffA02 88.10 Valine, leucine and isoleucine degradationPropanoate metabolismMetabolic pathwaysButanoate metabolismBeta-Alanine metabolism 3.40.640.10 260 31 95 2.37 2.48
2oatA02 87.96 Ornithine--oxo-acid transaminase [EC:2.6.1.13]Arginine and proline metabolismOrnithine-oxo-acid transaminase activityVisual perceptionHomo sapiens 3.40.640.10 250 30 91 1.84 2.00
2gsaA02 85.76 Porphyrin and chlorophyll metabolismGlutamate-1-semialdehyde 2,1-aminomutaseGlutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]Synechococcus elongatus PCC 6301Metabolic pathways 3.40.640.10 249 25 90 2.51 2.78
1ohvA02 84.31 Sus scrofaMitochondrial matrixSuccinate-semialdehyde dehydrogenase bindingProtein homodimerization activityPyridoxal phosphate binding 3.40.640.10 295 19 86 2.46 2.86
1bs0A02 80.80 Biotin metabolismMetabolic pathways8-amino-7-oxononanoate synthase [EC:2.3.1.47]8-amino-7-oxononanoate synthase activityBiotin biosynthetic process 3.40.640.10 228 16 82 3.05 3.68
1fc4A01 79.97 Glycine, serine and threonine metabolismMetal ion bindingLigase activity2-amino-3-ketobutyrate coenzyme A ligaseGlycine C-acetyltransferase [EC:2.3.1.29] 3.40.640.10 230 16 82 3.24 3.95
1xi9A02 78.19 Pyrococcus furiosusAminotransferase [EC:2.6.1.-]Alanine aminotransferase 3.40.640.10 242 15 83 4.04 4.83
1m32A02 77.95 2-aminoethylphosphonate--pyruvate transaminaseSalmonella enterica subsp. enterica serovar Typhimurium2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]Phosphonate and phosphinate metabolismMetabolic pathways 3.40.640.10 237 13 80 4.02 4.96
3k40A02 77.37 Dopamine biosynthetic process from tyrosineDevelopmental pigmentationGrowthProtein bindingDrosophila melanogaster 3.40.640.10 267 7 84 4.01 4.73
3dydA02 77.03 Tyrosine metabolismL-tyrosine:2-oxoglutarate aminotransferase activityPhenylalanine metabolismMetabolic pathwaysUbiquinone and other terpenoid-quinone biosynthesis 3.40.640.10 244 14 83 3.97 4.75
2qmaA03 76.84 Diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]Vibrio parahaemolyticusGlycine, serine and threonine metabolismDiaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylaseMetabolic pathways 3.40.640.10 238 9 79 3.80 4.78
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Displaying entries 1 to 12 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1s0aA02
HPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTF
RNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMR
MYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGALTGGTMTLSATLTTREVAETISNGEAG
CFMHGPTFMGNPLACAAANASLAILESG
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1s0aA02
HPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTF
RNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGM
RMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGXALTGGTMTLSATLTTREVAETISNGE
AGCFMHGPTFMGNPLACAAANASLAILESG
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:27

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:42

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"