CATH Domain: 1rypK00 XML data for domain: 1rypK00

Molscript image for 1rypK00
1rypK00
PDB coordinates for domain 1rypK00

PDB 1ryp, Chain K, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.60 4-Layer Sandwich
3.60.20 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1
3.60.20.10 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 Gene3D
3.60.20.10.18
3.60.20.10.18.1
3.60.20.10.18.1.1
3.60.20.10.18.1.1.1
3.60.20.10.18.1.1.1.1

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Segment boundaries for domain 1rypK00

Chopping figure for domain 1rypK00
DomainStart PDB ResidueStop PDB Residue
1rypK00 -1 197

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.60.20.10.18.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1q5qH00 85.73 Rhodococcus erythropolisProteasome beta-type subunit 1 3.60.20.10 224 17 87 2.39 2.72
2fhh200 85.06 ProteasomeProteasome beta subunit [EC:3.4.25.1]Proteasome subunit betaMycobacterium tuberculosis 3.60.20.10 222 17 88 2.51 2.83
3h6iQ00 83.90 ProteasomeProteasome subunit alphaProteasome alpha subunit [EC:3.4.25.1]Mycobacterium tuberculosis 3.60.20.10 218 13 84 2.96 3.51
1g3kA00 82.00 Haemophilus influenzaeATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.-]ATP-dependent protease hslV 3.60.20.10 173 15 85 3.01 3.53
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rypK00
MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAV
SSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDL
LKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rypK00
MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAV
SSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDL
LKLCVQELEKRMPMDFKGVIVKIVDKDGIRQVDDFQAQ
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:31

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:31

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:54

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"