CATH Domain: 1ryaA00 XML data for domain: 1ryaA00

Molscript image for 1ryaA00
1ryaA00
PDB coordinates for domain 1ryaA00

PDB 1rya, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.79 Nucleoside Triphosphate Pyrophosphohydrolase
3.90.79.10 Nucleoside Triphosphate Pyrophosphohydrolase Gene3D
3.90.79.10.1
3.90.79.10.1.1
3.90.79.10.1.1.1
3.90.79.10.1.1.1.1
3.90.79.10.1.1.1.1.1

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Segment boundaries for domain 1ryaA00

Chopping figure for domain 1ryaA00
DomainStart PDB ResidueStop PDB Residue
1ryaA00 1 160

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.90.79.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2fkbC00 82.90 [EC:3.6.-.-]Uncharacterized Nudix hydrolase yfcDProtein bindingEscherichia coli K-12 3.90.79.10 161 16 88 3.40 3.85
1hztA00 81.51 Terpenoid backbone biosynthesisMetabolic pathwaysIsopentenyl-diphosphate Delta-isomeraseIsopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]Isopentenyl-diphosphate delta-isomerase activity 3.90.79.10 153 16 82 2.92 3.54
3hyqA00 81.30 Terpenoid backbone biosynthesisMetabolic pathwaysIsopentenyl-diphosphate Delta-isomeraseIsopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]Salmonella enterica subsp. enterica serovar Typhimurium 3.90.79.10 148 17 82 3.45 4.18
2fmlA02 81.30 MutT/nudix family proteinEnterococcus faecalis 3.90.79.10 163 16 81 3.64 4.46
2pqvB00 80.28 MutT/nudix family proteinStreptococcus pneumoniae 3.90.79.10 148 16 87 3.67 4.19
2b0vA00 79.68 NUDIX hydrolaseNitrosomonas europaea 3.90.79.10 140 17 81 3.88 4.74
3fspA03 79.32 Geobacillus stearothermophilusA/G-specific adenine glycosylase 3.90.79.10 126 13 75 3.54 4.68
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ryaA00
MMFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAG
QFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ryaA00
MMFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGYWFVPGGRVQKDETLEAAFERLTMAELGLRLPITAG
QFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRVSEEELLLPDEQHDDYRWLTSDALLASDNVHANSRAYFLAEKRTGVPGL
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:42

Cut based on decision in database "DomChop" on "cathdb"