CATH Domain: 1ry6A00 XML data for domain: 1ry6A00

Molscript image for 1ry6A00
1ry6A00
PDB coordinates for domain 1ry6A00

PDB 1ry6, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.850 Kinesin
3.40.850.10 Kinesin Gene3D
3.40.850.10.3
3.40.850.10.3.1
3.40.850.10.3.1.1
3.40.850.10.3.1.1.1
3.40.850.10.3.1.1.1.1

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Segment boundaries for domain 1ry6A00

Chopping figure for domain 1ry6A00
DomainStart PDB ResidueStop PDB Residue
1ry6A00 1 330

Structural Neighbourhood (4 entries)

There are 4 matching structural neighberhood comparisons for CATH ID 3.40.850.10.3.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 4 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2nr8A00 85.34 3.40.850.10 304 28 88 2.93 3.33
3bfnA01 85.20 KinetochoreNucleusMitosisProtein bindingKinesin family member 22 3.40.850.10 272 29 78 2.23 2.86
3dc4A00 84.64 Distributive segregationDrosophila melanogasterMitotic spindle organizationEstablishment of meiotic spindle orientationKinesin-like protein Nod 3.40.850.10 291 31 84 2.32 2.75
2kinA00 81.01 Rattus norvegicusKinesin heavy chain isoform 5CProtein binding 3.40.850.10 238 32 68 2.80 4.12
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Displaying entries 1 to 4 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ry6A00
MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY
ENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKKEV
VVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINKNTSLGKIAFIDLAGSERGADTVSQNK
QTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ry6A00
MIKVVVRKRPLSELEKKKKDSDIITVKNNCTLYIDEPRYKVDMTKYIERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLY
ENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFTFLNIYDKDNTKGIFISFYEIYCGKLYDLLQKRKM
VAALENGKKEVVVKDLKILRVLTKEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINKNTSLGKIAFIDLAGS
ERGADTVSQNKQTQTDGANINRSLLALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLN
TLRYSSRVKN
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:29

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:52

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"