CATH Domain: 1rwzA00 XML data for domain: 1rwzA00

Molscript image for 1rwzA00
1rwzA00
PDB coordinates for domain 1rwzA00

PDB 1rwz, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.70 Box
3.70.10 Proliferating Cell Nuclear Antigen
3.70.10.10 Gene3D
3.70.10.10.2
3.70.10.10.2.1
3.70.10.10.2.1.1
3.70.10.10.2.1.1.1
3.70.10.10.2.1.1.1.1

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Segment boundaries for domain 1rwzA00

Chopping figure for domain 1rwzA00
DomainStart PDB ResidueStop PDB Residue
1rwzA00 1 244

Structural Neighbourhood (8 entries)

There are 8 matching structural neighberhood comparisons for CATH ID 3.70.10.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 8 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1u7bA00 88.84 Nucleotide excision repairDNA replicationBase excision repairCell cycleMismatch repair 3.70.10.10 251 23 95 2.03 2.13
1iz5A00 87.94 Pyrococcus furiosusDNA polymerase sliding clampDNA replicationNucleotide excision repairBase excision repair 3.70.10.10 240 26 95 1.85 1.94
1plqA00 86.11 DNA replicationProliferating cell nuclear antigenProliferating cell nuclear antigenPCNA complexProtein binding 3.70.10.10 258 22 93 2.43 2.61
1b77A00 77.88 DNA polymerase processivity componentEnterobacteria phage RB69 3.70.10.10 228 7 86 3.87 4.48
1t6lA00 76.80 DNA polymerase processivity factorHuman herpesvirus 5 strain AD169 3.70.10.10 249 10 89 3.43 3.81
1sxjH02 75.37 DNA replicationProliferating cell nuclear antigenProliferating cell nuclear antigenPCNA complexProtein binding 3.10.150.10 125 22 48 2.13 4.37
3d1gA01 72.96 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 3.10.150.10 123 8 46 2.29 4.90
3d1gA02 71.38 Pyrimidine metabolismDNA replicationPurine metabolismMetabolic pathwaysHomologous recombination 3.10.150.10 124 12 43 2.09 4.77
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Displaying entries 1 to 8 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rwzA00
MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS
ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG
FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKEFCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP
RIES
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rwzA00
MIDVIMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKS
ISTKDLVELIVEDESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEG
FRIEAKGDVDSIVFHMTETELIEFNGGEARSMFSVDYLKEFCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAP
RIESE
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:55

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"