CATH Domain: 1rwiA00 XML data for domain: 1rwiA00

Molscript image for 1rwiA00
1rwiA00
PDB coordinates for domain 1rwiA00

PDB 1rwi, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
2 Mainly Beta
2.120 6 Propellor
2.120.10 Neuraminidase
2.120.10.30 TolB, C-terminal domain Gene3D
2.120.10.30.9
2.120.10.30.9.1
2.120.10.30.9.1.1
2.120.10.30.9.1.1.1
2.120.10.30.9.1.1.1.1

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Segment boundaries for domain 1rwiA00

Chopping figure for domain 1rwiA00
DomainStart PDB ResidueStop PDB Residue
1rwiA00 11 270

Structural Neighbourhood (3 entries)

There are 3 matching structural neighberhood comparisons for CATH ID 2.120.10.30.9.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 3 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1npeA00 83.16 Mus musculusCell-matrix adhesionNidogen-1Collagen bindingBasement membrane 2.120.10.30 263 17 85 2.44 2.85
1v04A00 77.64 2.120.10.30 332 13 71 2.96 4.15
1ofzA00 75.62 Fucose-specific lectinAleuria aurantia 2.120.10.70 312 12 75 3.72 4.92
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Displaying entries 1 to 3 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rwiA00
GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLAGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAA
GSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVV
KLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN
DRVVKLTSLEHHHHHH
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rwiA00
RPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTV
YVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS
GNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA
VDSDRTVYVADRGNDRVVKLTSLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:42

Cut based on decision in database "DomChop" on "cathdb"