CATH Domain: 1rr8C04 XML data for domain: 1rr8C04

Molscript image for 1rr8C04
1rr8C04
PDB coordinates for domain 1rr8C04

PDB 1rr8, Chain C, Domain 4

CATH CodeLevel DescriptionLinks
1 Mainly Alpha
1.10 Orthogonal Bundle
1.10.132 Topoisomerase I; Chain A, domain 4
1.10.132.10 Gene3D
1.10.132.10.2
1.10.132.10.2.1
1.10.132.10.2.1.1
1.10.132.10.2.1.1.1
1.10.132.10.2.1.1.1.1

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Segment boundaries for domain 1rr8C04

Chopping figure for domain 1rr8C04
DomainStart PDB ResidueStop PDB Residue
1rr8C01 201 231
1rr8C01 320 430
1rr8C02 232 319
1rr8C03 431 585
1rr8C04 586 765

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 1.10.132.10.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1a35A04 94.18 NucleolusProtein bindingChromatin bindingDNA topoisomerase 1DNA topoisomerase I [EC:5.99.1.2] 1.10.132.10 97 97 88 0.66 0.74
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rr8C04
AKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQQAPREENKQIALGTSKLNLDPRITVAWCKKWG
VPIEKIYNKTQREKFAWAIDMADEDYEF
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rr8C04
AKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQQAPREENKQIALGTSKLNXLDPRITVAWCKKW
GVPIEKIYNKTQREKFAWAIDMADEDYEF
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:41

Cut based on decision in database "DomChop" on "cathdb"