CATH Domain: 1ro7C00 XML data for domain: 1ro7C00

Molscript image for 1ro7C00
1ro7C00
PDB coordinates for domain 1ro7C00

PDB 1ro7, Chain C, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.1480 sialyltransferase cstii, chain A
3.90.1480.10 sialyltransferase cstii, chain A Gene3D
3.90.1480.10.1
3.90.1480.10.1.1
3.90.1480.10.1.1.1
3.90.1480.10.1.1.1.1
3.90.1480.10.1.1.1.1.1

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Segment boundaries for domain 1ro7C00

Chopping figure for domain 1ro7C00
DomainStart PDB ResidueStop PDB Residue
1ro7C00 2 257

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.1480.10.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2p2vA00 91.45 Alpha-2,3-sialyltransferaseCampylobacter jejuni 3.90.1480.10 273 54 87 1.00 1.14
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ro7C00
KKVIIAGNGPSLKEIDYSRLPNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELICSNYN
QAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYCAVAIALGYKEIYLSGIDFYSYAFDTK
QKNLLKLAPGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIELAPNLNSNFIIQEKNNYTKDILIPSSEAYGKFSKN
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ro7C00
XKKVIIAGNGPSLKEIDYSRLPNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELIXCSN
YNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYXCAVAIALGYKEIYLSGIDFYQNGS
SYAFDTKQKNLLKLAPNFKNDNSHYIGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIELAPNLNSNFIIQEKNNYT
KDILIPSSEAYGKFSKNIN
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:43

Assigning to "3.90.1480.10" based on similarity with "1ro7A00" (NWSI: 98.8416988416988, NWO: 100, SPS: 97.15, SPO: 94, RMSD: 0.29)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1ro7C00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1ro7C00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1ro7C00"

Insertion by auto on 09 Mar 2006 01:44

Final ChopClose added based on similarity with "1ro7A" [LEE: 0, LME: 0, MR: 1, LG: 10, SS: 97.15, SI: 98.8416988416988, SO: 100]