CATH Domain: 1rlmA02 XML data for domain: 1rlmA02

Molscript image for 1rlmA02
1rlmA02
PDB coordinates for domain 1rlmA02

PDB 1rlm, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.1240 Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2
3.30.1240.10 Gene3D
3.30.1240.10.2
3.30.1240.10.2.1
3.30.1240.10.2.1.1
3.30.1240.10.2.1.1.1
3.30.1240.10.2.1.1.1.1

[top]
Segment boundaries for domain 1rlmA02

Chopping figure for domain 1rlmA02
DomainStart PDB ResidueStop PDB Residue
1rlmA01 2 82
1rlmA01 190 270
1rlmA02 83 189

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.30.1240.10.2.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1nf2A02 86.88 Thermotoga maritimaPutative uncharacterized protein 3.30.1240.10 106 10 96 2.11 2.19
3dnpA02 84.60 Stress response protein yhaXBacillus subtilis 3.30.1240.10 106 6 92 3.44 3.72
1nrwA02 81.51 Bacillus subtilisUncharacterized phosphatase ywpJ 3.30.1240.10 130 7 77 2.78 3.58
1s2oA02 75.67 Synechocystis sp. PCC 6803Slr0953 protein 3.90.1070.10 71 19 63 3.13 4.93
1wqgA02 75.49 Ribosome recycling factorMycobacterium tuberculosisRibosome-recycling factor 3.30.1360.40 75 10 57 2.71 4.75
1u02A02 73.54 Trehalose-6-phosphate phosphatase related proteinThermoplasma acidophilum 3.30.70.1020 73 8 59 2.74 4.58
2hfvA01 73.15 Rhodopseudomonas palustrisPutative uncharacterized protein 3.30.70.790 77 5 56 2.68 4.78
[1]
Displaying entries 1 to 7 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1rlmA02
ELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVI
DKLHVALDGIMKPVTSGFGFIDLIIPG
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1rlmA02
ELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVI
DKLHVALDGIMKPVTSGFGFIDLIIPG
BLAST against CATH

[top]
Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:40

Cut based on decision in database "DomChop" on "cathdb"