CATH Domain: 1rljA00 XML data for domain: 1rljA00

Molscript image for 1rljA00
1rljA00
PDB coordinates for domain 1rljA00

PDB 1rlj, Chain A, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.360 Gene3D
3.40.50.360.9
3.40.50.360.9.2
3.40.50.360.9.2.1
3.40.50.360.9.2.1.1
3.40.50.360.9.2.1.1.1

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Segment boundaries for domain 1rljA00

Chopping figure for domain 1rljA00
DomainStart PDB ResidueStop PDB Residue
1rljA00 -9 126

Structural Neighbourhood (51 entries)

There are 51 matching structural neighberhood comparisons for CATH ID 3.40.50.360.9.2.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 51 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
5nulA00 82.71 Clostridium beijerinckiiFlavodoxin 3.40.50.360 138 14 81 2.47 3.04
2ohhA02 82.71 Type A flavoprotein fprAMethanothermobacter marburgensis str. Marburg 3.40.50.360 144 15 77 2.68 3.48
1e5dA01 81.61 Desulfovibrio gigasRubredoxin-oxygen oxidoreductase 3.40.50.360 143 18 77 2.74 3.53
3d7nA00 79.78 Agrobacterium tumefaciens str. C58Flavodoxin, WrbA-like protein 3.40.50.360 153 16 73 3.00 4.06
1bvyF00 79.16 Bacillus megateriumBifunctional P-450/NADPH-P450 reductase 3.40.50.360 152 14 76 3.48 4.52
2qzjA00 78.73 Two-component response regulatorClostridium difficile 630 3.40.50.2300 119 3 87 4.18 4.78
1zgzA00 78.42 Two-component systemTorCAD operon transcriptional regulatory protein torRTwo-component system, OmpR family, torCAD operon response regulator TorRProtein bindingEscherichia coli K-12 3.40.50.2300 118 5 88 3.67 4.12
2qvgA00 78.05 Two component response regulator[EC:2.7.3.-]Legionella pneumophila subsp. pneumophila str. Philadelphia 1 3.40.50.2300 126 7 85 4.04 4.71
2zayA00 78.04 Response regulator receiver proteinDesulfuromonas acetoxidans DSM 684 3.40.50.2300 123 11 89 3.93 4.39
3b2nA00 78.03 Similar to two-component response regulatorStaphylococcus aureus subsp. aureus Mu50 3.40.50.2300 119 6 89 4.45 4.95
1dbwB00 77.97 Sinorhizobium melilotiTranscriptional regulatory protein fixJ 3.40.50.2300 125 11 87 3.94 4.52
2b4aA00 77.80 BH3024 proteinBacillus halodurans 3.40.50.2300 116 6 87 3.79 4.34
1srrC00 77.74 Sporulation initiation phosphotransferase FTwo-component system, response regulator, stage 0 sporulation protein FBacillus subtilisTwo-component system 3.40.50.2300 121 8 88 4.16 4.70
1ys7A01 77.49 Transcriptional regulatory protein prrAMycobacterium tuberculosis 3.40.50.2300 122 6 90 4.37 4.85
2eklA01 77.28 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]Sulfolobus tokodaiiGlycine, serine and threonine metabolismMetabolic pathways313aa long hypothetical D-3-phosphoglycerate dehydrogenase 3.40.50.720 121 10 85 3.84 4.51
1qo0D01 77.23 Pseudomonas aeruginosaAliphatic amidase regulator 3.40.50.2300 127 7 85 3.49 4.07
2rdmA00 77.13 Response regulator receiver proteinSinorhizobium medicae WSM419 3.40.50.2300 117 5 88 4.08 4.63
2qv0A00 77.03 Protein mrkEKlebsiella pneumoniae 3.40.50.2300 122 5 88 4.18 4.72
1p2fA01 77.00 Thermotoga maritimaResponse regulatorTwo-component system, OmpR family, response regulator 3.40.50.2300 117 6 89 4.15 4.62
1jr2A01 76.81 Uroporphyrinogen-III synthase [EC:4.2.1.75]Metabolic pathwaysPorphyrin and chlorophyll metabolismUroporphyrinogen-III synthase activityHomo sapiens 3.40.50.10090 120 9 85 3.27 3.85
2qxyA00 76.65 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulator 3.40.50.2300 118 6 89 3.63 4.04
1zjjA02 76.57 4-nitrophenyl phosphatase [EC:3.1.3.41]Pyrococcus horikoshiiGamma-Hexachlorocyclohexane degradationPutative uncharacterized protein PH1952 3.40.50.10410 117 5 77 3.88 4.98
2qsjB00 76.50 DNA-binding response regulator, LuxR familyRuegeria pomeroyi 3.40.50.2300 122 5 83 4.11 4.92
1jbeA00 76.44 Bacterial chemotaxisTwo-component systemEscherichia coli O157:H7Two-component system, chemotaxis family, response regulator CheYChemotaxis protein cheY 3.40.50.2300 125 9 87 4.21 4.83
3gl9B00 76.24 Thermotoga maritimaResponse regulatorTwo-component system, unclassified family, response regulatorProtein binding 3.40.50.2300 118 5 90 4.26 4.70
1mb3A00 76.22 Caulobacter vibrioidesTwo-component systemTwo-component system, cell cycle response regulator DivKPolar differentiation response regulatorCell cycle - Caulobacter 3.40.50.2300 115 8 88 4.12 4.67
3cnbA00 76.18 DNA-binding response regulator, merR familyColwellia psychrerythraea 34H 3.40.50.2300 124 8 88 4.34 4.89
3cu5B00 76.07 Clostridium phytofermentans ISDgTwo component transcriptional regulator, AraC family 3.40.50.2300 129 7 84 4.18 4.95
1a04A01 75.95 Two-component systemTwo-component system, NarL family, nitrate/nitrite response regulator NarLProtein bindingEscherichia coli K-12Nitrate/nitrite response regulator protein narL 3.40.50.2300 124 3 85 3.39 3.97
1vmeA02 75.94 Thermotoga maritimaPutative uncharacterized protein 3.40.50.360 144 17 77 3.60 4.63
2g76A01 75.77 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]D-3-phosphoglycerate dehydrogenaseGlycine, serine and threonine metabolismBrain developmentMetabolic pathways 3.40.50.720 112 12 83 4.18 4.98
1dcfA00 75.73 Response to insectResponse to abscisic acid stimulusResponse to heatResponse to gibberellin stimulusDefense response to bacterium 3.40.50.2300 133 5 82 3.51 4.24
1w25B02 75.62 Two-component systemCell cycle - CaulobacterCaulobacter vibrioidesIdentical protein bindingTwo-component system, cell cycle response regulator 3.40.50.2300 143 7 76 3.77 4.95
3gfsC00 75.61 Bacillus subtilisFMN-dependent NADPH-azoreductase 3.40.50.360 169 15 68 2.63 3.86
1a2oA01 75.55 Bacterial chemotaxisTwo-component systemChemotaxis response regulator protein-glutamate methylesteraseTwo-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]Salmonella enterica subsp. enterica serovar Typhimurium 3.40.50.2300 133 12 81 3.95 4.86
3cg4A00 75.43 Response regulator receiver domain protein (CheY-like)Methanospirillum hungatei JF-1 3.40.50.2300 115 9 86 4.12 4.77
2driA01 75.41 Bacterial chemotaxisABC transportersD-ribose-binding periplasmic proteinRibose transport system substrate-binding proteinMembrane 3.40.50.2300 125 14 74 3.66 4.92
1wcwA01 75.39 Thermus thermophilus HB8Uroporphyrinogen-III synthase [EC:4.2.1.75]Probable uroporphyrinogen-III synthasePorphyrin and chlorophyll metabolismMetabolic pathways 3.40.50.10090 125 11 83 3.75 4.51
2qr3A00 75.29 Bacteroides fragilisTwo-component system response regulator 3.40.50.2300 119 10 82 3.65 4.43
2arkA00 75.29 FlavodoxinAquifex aeolicus 3.40.50.360 180 18 62 2.92 4.69
3ff4A00 75.21 Cytophaga hutchinsonii ATCC 33406Putative uncharacterized protein 3.40.50.720 119 10 81 3.37 4.13
2rjnA00 75.20 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomainNeptuniibacter caesariensis 3.40.50.2300 135 10 82 4.06 4.94
1eiwA00 74.96 Methanothermobacter thermautotrophicus str. Delta HProtein MTH_538 3.40.50.9200 111 6 85 4.06 4.74
1ny5A01 74.86 Transcriptional regulator (NtrC family)Two-component system, NtrC family, response regulatorAquifex aeolicus 3.40.50.2300 136 6 80 4.02 4.97
2q5cA01 74.81 Clostridium acetobutylicumNtrC family transcriptional regulator (PAS and AAA domains) 3.40.50.2300 97 13 75 3.64 4.83
3d4oB01 74.60 Dipicolinate synthase subunit ABacillus haloduransDipicolinate synthase subunit A 3.40.50.720 139 9 77 3.81 4.90
1rkuA01 74.43 Glycine, serine and threonine metabolismMetabolic pathwaysPhosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39]Pseudomonas aeruginosaHomoserine kinase 3.40.50.1000 111 7 75 3.74 4.96
3ctpA01 74.24 Alkaliphilus metalliredigens QYMFPeriplasmic binding protein/LacI transcriptional regulator 3.40.50.2300 128 4 68 3.39 4.93
1ur5C01 73.16 Malate dehydrogenase [EC:1.1.1.37]Citrate cycle (TCA cycle)Pyruvate metabolismChloroflexus aurantiacus J-10-flMetabolic pathways 3.40.50.720 136 5 66 3.14 4.69
1tzbA01 71.54 Amino sugar and nucleotide sugar metabolismBifunctional phosphoglucose/phosphomannose isomeraseGlucose-6-phosphate isomerase [EC:5.3.1.9]Fructose and mannose metabolismMetabolic pathways 3.40.50.10490 162 10 59 2.98 4.98
3d0oA01 70.69 Pyruvate metabolismPropanoate metabolismMetabolic pathwaysCysteine and methionine metabolismGlycolysis / Gluconeogenesis 3.40.50.720 143 6 62 3.10 4.93
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Displaying entries 1 to 51 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rljA00
ENLYFQSNAMVQIIFDSKTGNVQRFVNKTGFQQIRKVDEMDHVDTPFVLVTYTTNFGQVPASTQSFLEKYAHLLLGVAAS
GNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKM
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rljA00
ENLYFQSNAMVQIIFDSKTGNVQRFVNKTGFQQIRKVDEMDHVDTPFVLVTYTTNFGQVPASTQSFLEKYAHLLLGVAAS
GNKVWGDNFAKSADTISRQYQVPILHKFELSGTSKDVELFTQEVERVVTKSSAKMDPVK
BLAST against CATH

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Domain History Events (3)

Insertion by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Flow stage update by sillitoe on 06 Mar 2006 15:40

HomCheck 'Assigned H' domains

Insertion by auto on 05 Mar 2006 23:40

Cut based on decision in database "DomChop" on "cathdb"