CATH Domain: 1rl4B00 XML data for domain: 1rl4B00

Molscript image for 1rl4B00
1rl4B00
PDB coordinates for domain 1rl4B00

PDB 1rl4, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.90 Alpha-Beta Complex
3.90.45 Peptide Deformylase
3.90.45.10 Peptide Deformylase Gene3D
3.90.45.10.5
3.90.45.10.5.1
3.90.45.10.5.1.1
3.90.45.10.5.1.1.1
3.90.45.10.5.1.1.1.1

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Segment boundaries for domain 1rl4B00

Chopping figure for domain 1rl4B00
DomainStart PDB ResidueStop PDB Residue
1rl4B00 66 232

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.90.45.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1lmeA00 92.51 Thermotoga maritimaPeptide deformylase[EC:3.5.1.88] 3.90.45.10 153 38 87 0.80 0.91
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1rl4B00
KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNRIFINPSIVEQSLVKLKLIEGC
LSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVDKKKVRPKLNELIRDYK
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1rl4B00
MSKNEKDEIKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNISKRIIVWNALYEKRKEENERI
FINPSIVEQSLVKLKLIEGCLSFPGIEGKVERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQVD
KKKVRPKLNELIRDYKATHSLEHHHHHH
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:32

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:56

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"