CATH Domain: 1ra0A02 XML data for domain: 1ra0A02

Molscript image for 1ra0A02
1ra0A02
PDB coordinates for domain 1ra0A02

PDB 1ra0, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.20 Alpha-Beta Barrel
3.20.20 TIM Barrel
3.20.20.140 Metal-dependent hydrolases Gene3D
3.20.20.140.2
3.20.20.140.2.1
3.20.20.140.2.1.1
3.20.20.140.2.1.1.1
3.20.20.140.2.1.1.1.1

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Segment boundaries for domain 1ra0A02

Chopping figure for domain 1ra0A02
DomainStart PDB ResidueStop PDB Residue
1ra0A01 4 56
1ra0A01 365 426
1ra0A02 57 364

Structural Neighbourhood (9 entries)

There are 9 matching structural neighberhood comparisons for CATH ID 3.20.20.140.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 9 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2qt3A02 88.90 N-isopropylammelide isopropyl amidohydrolasePseudomonas sp. ADP 3.20.20.140 301 28 94 1.98 2.10
1p1mA02 81.77 Thermotoga maritima5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.- 3.5.4.28]5-methylthioadenosine/S-adenosylhomocysteine deaminase 3.20.20.140 281 16 85 2.48 2.92
2i9uA02 80.31 Cytosine/guanine deaminase related proteinGuanine deaminase [EC:3.5.4.3]Purine metabolismMetabolic pathwaysClostridium acetobutylicum 3.20.20.140 308 14 86 3.27 3.80
2pajA02 79.81 3.20.20.140 276 16 80 2.81 3.48
2oodA02 78.77 Bradyrhizobium japonicumGuanine deaminase [EC:3.5.4.3]Purine metabolismBlr3880 proteinMetabolic pathways 3.20.20.140 318 13 83 3.09 3.72
3feqC02 78.26 3.20.20.140 299 11 80 3.87 4.79
3be7A02 77.41 3.20.20.140 295 8 79 3.69 4.66
3iarA00 75.06 Regulation of cell-cell adhesion mediated by integrinAdenosine deaminase [EC:3.5.4.4]Zinc ion bindingPurine metabolismInosine biosynthetic process 3.20.20.140 360 10 76 3.51 4.58
1j6oA00 74.73 Thermotoga maritimaTatD DNase family protein [EC:3.1.21.-]Putative uncharacterized protein 3.20.20.140 259 11 77 3.79 4.86
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Displaying entries 1 to 9 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1ra0A02
FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAM
LEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCD
EIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGIT
RVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQ
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1ra0A02
FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAM
LEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCD
EIDDEQSRFVETVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKRRGIT
RVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLMGYGQINDGLNLITHHSARTLNLQ
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:38

Assigning to "3.20.20.140" based on similarity with "1r9xA02" (NWSI: 100, NWO: 100, SPS: 98.24, SPO: 100, RMSD: 1.26)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1ra0A02"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1ra0A02"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1ra0A02"

Insertion by auto on 05 Mar 2006 23:39

Cut based on decision in database "DomChop" on "cathdb"