CATH Domain: 1r6xA02 XML data for domain: 1r6xA02

Molscript image for 1r6xA02
1r6xA02
PDB coordinates for domain 1r6xA02

PDB 1r6x, Chain A, Domain 2

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.50 Rossmann fold
3.40.50.620 Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1 Gene3D
3.40.50.620.2
3.40.50.620.2.1
3.40.50.620.2.1.1
3.40.50.620.2.1.1.1
3.40.50.620.2.1.1.1.1

[top]
Segment boundaries for domain 1r6xA02

Chopping figure for domain 1r6xA02
DomainStart PDB ResidueStop PDB Residue
1r6xA01 2 162
1r6xA02 175 387

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.50.620.2.1.1.1.1 (SIMAX score < 5)

[1]
Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
1yumA00 75.89 Nicotinate and nicotinamide metabolismMetabolic pathwaysPseudomonas aeruginosaProbable nicotinate-nucleotide adenylyltransferaseNicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] 3.40.50.620 212 9 72 3.49 4.83
[1]
Displaying entries 1 to 1 (page 1 of 1)


[top]
Domain ATOM Sequence 

>pdb|1r6xA02
TPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGIA
FLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYL
PDEDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRES
BLAST against CATH

[top]
Domain COMBS Sequence 

>pdb|1r6xA02
TPAQLRLEFQSRQWDRVVAFQTRNPMHRAHRELTVRAAREANAKVLIHPVVGLTKPGDIDHHTRVRVYQEIIKRYPNGIA
FLSLLPLAMRMSGDREAVWHAIIRKNYGASHFIVGRDHAGPGKNSKGVDFYGPYDAQELVESYKHELDIEVVPFRMVTYL
PDEDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRESNPPRPKGSS
BLAST against CATH

[top]
Domain History Events (6)

Domain assigned by auto on 08 Dec 2006 17:19

Assigning to "3.40.50.620" based on similarity with "1g8fA01"

Flow stage update by auto on 08 Dec 2006 17:17

No in_process hits for Domain "1r6xA02" ready to be processed

Flow stage update by auto on 08 Dec 2006 17:17

NW result present for Domain "1r6xA02"

Flow stage update by auto on 07 Dec 2006 17:18

All required files are present for Domain "1r6xA02"

Flow stage update by auto on 06 Dec 2006 17:22

Beginning processing for Domain "1r6xA02"

Insertion by cuff on 06 Dec 2006 15:45

another small batch of choppings