CATH Domain: 1r5tB00 XML data for domain: 1r5tB00

Molscript image for 1r5tB00
1r5tB00
PDB coordinates for domain 1r5tB00

PDB 1r5t, Chain B, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.40 3-Layer(aba) Sandwich
3.40.140 Cytidine Deaminase; domain 2
3.40.140.10 Cytidine Deaminase, domain 2 Gene3D
3.40.140.10.5
3.40.140.10.5.1
3.40.140.10.5.1.1
3.40.140.10.5.1.1.1
3.40.140.10.5.1.1.1.1

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Segment boundaries for domain 1r5tB00

Chopping figure for domain 1r5tB00
DomainStart PDB ResidueStop PDB Residue
1r5tB00 1 139

Structural Neighbourhood (1 entries)

There are 1 matching structural neighberhood comparisons for CATH ID 3.40.140.10.5.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 1 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
3ijfX00 90.11 Pyrimidine metabolismMetabolic pathwaysCytidine deaminaseCytidine deaminase [EC:3.5.4.5]Mycobacterium tuberculosis 3.40.140.10 123 30 88 2.00 2.26
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Displaying entries 1 to 1 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1r5tB00
MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWK
CMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPS
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1r5tB00
MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWK
CMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPSHLN
BLAST against CATH

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Domain History Events (5)

Domain assigned by auto on 28 Apr 2006 18:36

Assigning to "3.40.140.10" based on similarity with "1r5tA00" (NWSI: 100, NWO: 100, SPS: 97.56, SPO: 97, RMSD: 0.58)

Flow stage update by auto on 28 Apr 2006 17:50

NW result present for Domain "1r5tB00"

Flow stage update by auto on 28 Apr 2006 17:44

All required files are present for Domain "1r5tB00"

Flow stage update by auto on 27 Apr 2006 17:31

Beginning processing for Domain "1r5tB00"

Insertion by auto on 09 Mar 2006 00:25

Final ChopClose added based on similarity with "1r5tA" [LEE: 1, LME: 0, MR: 3, LG: 3, SS: 97.56, SI: 100, SO: 100]