CATH Domain: 1r31A01 XML data for domain: 1r31A01

Molscript image for 1r31A01
1r31A01
PDB coordinates for domain 1r31A01

PDB 1r31, Chain A, Domain 1

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.70 Alpha-Beta Plaits
3.30.70.420 Gene3D
3.30.70.420.2
3.30.70.420.2.1
3.30.70.420.2.1.1
3.30.70.420.2.1.1.1
3.30.70.420.2.1.1.1.1

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Segment boundaries for domain 1r31A01

Chopping figure for domain 1r31A01
DomainStart PDB ResidueStop PDB Residue
1r31A01 111 220
1r31A02 4 108
1r31A02 221 375

Structural Neighbourhood (13 entries)

There are 13 matching structural neighberhood comparisons for CATH ID 3.30.70.420.2.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 13 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2pgcA01 76.57 3.30.70.900 95 10 80 3.84 4.80
2w25A02 76.11 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory proteinLeucine-responsive regulatory proteinMycobacterium tuberculosis 3.30.70.920 81 14 63 3.17 4.98
1m1hA01 76.10 Transcriptional antiterminator NusGTranscription antitermination protein nusGAquifex aeolicus 3.30.70.940 100 8 73 3.62 4.92
2pd1A01 75.91 Nitrosomonas europaeaPutative uncharacterized protein 3.30.70.900 93 7 75 3.69 4.89
2nuhA00 75.88 Xylella fastidiosaPeriplasmic divalent cation tolerance proteinPeriplasmic divalent cation tolerance protein 3.30.70.830 104 5 73 3.48 4.73
1ib8A01 75.70 Hypothetical proteinRibosome maturation factor rimPStreptococcus pneumoniae 3.30.300.70 83 12 72 3.44 4.73
2j8sA03 75.66 Hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 familyAcriflavine resistance protein BProtein bindingEscherichia coli K-12 3.30.70.1320 100 11 80 3.44 4.30
1iujB00 75.47 TT1380 proteinThermus thermophilus 3.30.70.900 103 6 80 4.03 4.98
3c19A01 75.42 Methanopyrus kandleriUncharacterized conserved protein 3.30.70.1380 98 10 77 3.74 4.84
1in0A01 74.60 Hypothetical proteinHaemophilus influenzaeUPF0234 protein HI_1034 3.30.70.860 70 8 54 2.52 4.62
1tuwA00 73.69 Streptomyces glaucescensTetracenomycin polyketide synthesis protein tcmI 3.30.70.1090 106 5 80 3.62 4.53
1lfpA03 73.34 UPF0082 protein aq_1575Aquifex aeolicus 3.30.70.980 73 2 64 3.00 4.65
1utaA00 73.23 Membrane fractionCell cycle cytokinesisCell division protein FtsNCell division protein ftsNProtein binding 3.30.70.1070 77 9 65 3.00 4.58
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Displaying entries 1 to 13 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1r31A01
LMHAQVQIVGIQDPLNARLSLLRRKDEIIELANRKDQLLNSLGGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANTV
NTMAEAVAPLMEAITGGQVRLRILSNLADL
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1r31A01
LMHAQVQIVGIQDPLNARLSLLRRKDEIIELANRKDQLLNSLGGGCRDIEVHTFADTPRGPMLVAHLIVDVRDAMGANTV
NTMAEAVAPLMEAITGGQVRLRILSNLADL
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 19:01

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 17:39

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"