CATH Domain: 1r0rI00 XML data for domain: 1r0rI00

Molscript image for 1r0rI00
1r0rI00
PDB coordinates for domain 1r0rI00

PDB 1r0r, Chain I, Domain 0

CATH CodeLevel DescriptionLinks
3 Alpha Beta
3.30 2-Layer Sandwich
3.30.60 Wheat Germ Agglutinin (Isolectin 2); domain 1
3.30.60.30 Gene3D
3.30.60.30.1
3.30.60.30.1.1
3.30.60.30.1.1.1
3.30.60.30.1.1.1.1
3.30.60.30.1.1.1.1.1

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Segment boundaries for domain 1r0rI00

Chopping figure for domain 1r0rI00
DomainStart PDB ResidueStop PDB Residue
1r0rI00 6 56

Structural Neighbourhood (7 entries)

There are 7 matching structural neighberhood comparisons for CATH ID 3.30.60.30.1.1.1.1.1 (SIMAX score < 5)

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Displaying entries 1 to 7 (page 1 of 1)
Match Depth Match SSAP score Match Keywords Match Superfamily Length Sequence Id Overlap RMSD SIMAX
2erwA00 89.56 Triatoma infestansThrombin inhibitor infestin 3.30.60.30 53 39 84 1.74 2.05
1tgsI00 89.55 Sus scrofaPancreatic secretory trypsin inhibitor 3.30.60.30 56 25 91 2.44 2.68
2b0uC03 88.37 Homo sapiensNegative regulation of transcription from RNA polymerase II promoterFollistatinPositive regulation of hair follicle developmentActivin binding 3.30.60.30 41 29 74 1.30 1.74
1z7kB00 87.95 Meleagris gallopavoOvomucoid 3.30.60.30 62 35 82 2.27 2.76
1ldtL00 86.98 Hirudo medicinalisLeech-derived tryptase inhibitor C 3.30.60.30 46 28 78 2.83 3.61
2jxdA00 78.96 Homo sapiensSerine protease inhibitor Kazal-type 2 3.30.60.30 62 35 82 3.38 4.11
1iw4A00 74.65 Halocynthia roretziTrypsin inhibitor 3.30.60.30 55 17 87 3.34 3.83
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Displaying entries 1 to 7 (page 1 of 1)


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Domain ATOM Sequence 

>pdb|1r0rI00
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
BLAST against CATH

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Domain COMBS Sequence 

>pdb|1r0rI00
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC
BLAST against CATH

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Domain History Events (3)

Set cath from cathlist by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Flow stage update by auto on 05 Mar 2006 18:58

This domain was assigned by cathlist2DB and was parsed from the cath list "/usr/local/cvs/source/lists/CathList"

Insertion by auto on 05 Mar 2006 15:25

PDB chopped based on information from the domall file "/usr/local/cvs/source/lists/CathDomall"